Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01275 ATGGTGAACCTGGTGGCAGCACAGAGGCCATTGTTACATGGCCTCATGAAGATGGCAGGGGTGAGGCCCTACACGGTGGAGATTGAGCCCGGGACCGTGATGAGTTTCTGGGTCCCTTCTGAAACACTAACGAAGCCGAAGAAAAAAAACGAGAAGCCCAGAATCAGCTCGAAGCCCAGCAGGCCCGCGGTGGTTCTGGTGCACGGCTTTGGCGCCGAGGGAATCATGACATGGCAGTATCAAGTTGGCGCCTTGACAAAAAAATACGCAGTCTACGTTCCTGACCTCCTCTTCTTCGGGGGCTCCACCACCGACAAACCCCACCGGTCGCCGGCGTTTCAGGCGCAGTGTGTGGTGGCGGGGTTGAGGAAGCTCGGGGTGGAGAAGTGCATAGTGGTTGGGTACAGTTATGGGGGGATGGTGGCGTTTAAGATGGCTGAGATGTACCCAGAAGTGGTTGAAGCGTTGGTTATCACAGGGTCCATTTTGGCCATGACGGACTCCATCAGCGCCACCTCACTGCAAGAGCTAGGGTTTTCTTCTTCCTCCGAGCTCTTGTTGCCTACTTCTGTTAAGGGTCTCAAGGCACTCTTGACCGTGGCTTCGCACAAGAAGCAGTGGTATCCCAATCGTTTGCTCAAAGATTATCTCGAGGTGATGATCACGAATAGGAAGGAACGAGGTGAACTATTGGAAGCCTTAGTAGTTAGCGACAAAGATATCATCATCCCAAATTTTTCACAGAGAATACATCTTTTATGGGGAGAGAATGATAAAATATTCAATCTGGAGCTTGCGCAAAATATGAAAGAACAACTAGGGGATGGTACAACATTTGAAGCCATAAAGAAAGCTGGTCACATGGTTAACATGGAACGACCCCGTCTCTTCAACAGATGTCTCAAGCAGTTTATTGCCTCCTTCTTGGCCCCAAATGGACCCAAAAAATAA 951 0.5026 MVNLVAAQRPLLHGLMKMAGVRPYTVEIEPGTVMSFWVPSETLTKPKKKNEKPRISSKPSRPAVVLVHGFGAEGIMTWQYQVGALTKKYAVYVPDLLFFGGSTTDKPHRSPAFQAQCVVAGLRKLGVEKCIVVGYSYGGMVAFKMAEMYPEVVEALVITGSILAMTDSISATSLQELGFSSSSELLLPTSVKGLKALLTVASHKKQWYPNRLLKDYLEVMITNRKERGELLEALVVSDKDIIIPNFSQRIHLLWGENDKIFNLELAQNMKEQLGDGTTFEAIKKAGHMVNMERPRLFNRCLKQFIASFLAPNGPKK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01275 316 PANTHER SI:DKEY-122A22.2 2 308 - -
Gma16g01275 316 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Gma16g01275 316 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Gma16g01275 316 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Gma16g01275 316 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Gma16g01275 316 Gene3D alpha/beta hydrolase 17 308 IPR029058 -
Gma16g01275 316 SUPERFAMILY alpha/beta-Hydrolases 58 306 IPR029058 -
Gma16g01275 316 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 308 - -
Gma16g01275 316 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Gma16g01275 316 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Gma16g01275 316 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Gma16g01275 316 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Gma16g01275 316 Pfam alpha/beta hydrolase fold 62 171 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01275 Gma-Chr16 31214179 31218739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01275 63 309 Miscellaneous Gene Families AT1G80280 21.147 3.39e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01275 - - gmx:100816070 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00512 02 5103546 5107423 Gma16g01275 16 31214179 31218739 ECH
Gma16g01275 16 31214179 31218739 Gma16g01275 16 31214179 31218739 ECH
Gma16g01275 16 31214179 31218739 Gma02g00512 02 5103546 5107423 GST