Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01265 ATGGCAGCAGAATCATCAGAGGGCGAAGAAGAAACCAAGTTAAGCGGAGGTAACCAATTGCTCATAGTTGACGATGACTTAACGGAAATGGGAAAGAAAGCCGCTTGGAGCGTGAGTTCCTGCAAACCCGGTAACGGCGTTTCCTCTCTCCGTGACGACAATCTCGAAACTTATTGGCAATCCGACGGAGGGCAACCCCATTTAGTTAACATTCAGTTTCAGAAGAAAGTTAGACTTCAATTAATTGTGCTGTACGTGGATTTCAAGCTTGACGAGAGTTACACGCCGAGCAAAGTTTCCATCCGTGCCGGTGATGGTTTTCACAACTTGAAGGAGATTAAGACCGTGGAACTCGTGAAGCCAACTGGGTGGGTTTATCTTTCCTTGTCTGGAGTTGATCCTAGGGATACCTTTGTGAATACTTTCATGTTGCAAATTGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCACGTGCGGCAGATCAAAGTTTACGGGCCTCGACCGAACCCTATCCCACATCAGCCATTCCAATTTACTTCAAGGGAATTCATCACCTACTCTTCTATAAGATGA 579 0.4577 MAAESSEGEEETKLSGGNQLLIVDDDLTEMGKKAAWSVSSCKPGNGVSSLRDDNLETYWQSDGGQPHLVNIQFQKKVRLQLIVLYVDFKLDESYTPSKVSIRAGDGFHNLKEIKTVELVKPTGWVYLSLSGVDPRDTFVNTFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPHQPFQFTSREFITYSSIR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01265 192 PANTHER ANAPHASE-PROMOTING COMPLEX 10 11 192 IPR016901 GO:0005680|GO:0031145
Gma16g01265 192 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 11 192 - -
Gma16g01265 192 SMART APC10_2 27 191 IPR004939 -
Gma16g01265 192 PIRSF APC10 2 192 IPR016901 GO:0005680|GO:0031145
Gma16g01265 192 Gene3D - 1 169 - -
Gma16g01265 192 CDD APC10 29 167 IPR016901 GO:0005680|GO:0031145
Gma16g01265 192 SUPERFAMILY Galactose-binding domain-like 21 168 IPR008979 -
Gma16g01265 192 Pfam Anaphase-promoting complex, subunit 10 (APC10) 19 189 IPR004939 -
Gma16g01265 192 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01265 Gma-Chr16 31094498 31096733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01265 K03357 - gmx:100526925 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01265 16 31094498 31096733 Gma16g01265 16 31094498 31096733 ECH
Gma16g01265 16 31094498 31096733 Gma02g00503 02 5031617 5034500 GST