Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01251 ATGGAAGTAGCAAAGGTACTGCACATGAACGGTGGCGTTGGAGACGCAAGCTATGCAAACAACTCCTTTGTTCAGCAAAAGTTGATTTGTTTGACAAAGCCCTTAAGAGAAGAAGCCATAAAAAGCCTCTATTGCGGCACACTCCCCAGAAGGTTGGCAATGGCAGATTTGGGTTGCTCTTCTGGGCAACATGCTTTAATTGTCGTGTCAGACTTCATCAAAACTGTGGAGAAGCTTTGCCTAGAATTGAACCATAAATCTCCGGAATACAAGGTTTTTTTTAACGATCTTCCTGGGAATGACTTCAACAACATATTTAAGTCCCTTGACAGCTTCAAACAGAAGTTGTGTGAAGAAATGGAAAGTGGGATTGGTCCATGCTACTTCTTTGGTGCTCCAGGTTCTTTCTATGGCAGGATTttctcaaaccaaagtgtgcattttatccattcctcttatagccttcaatggctatctaagGTTCCCGAGTGTATAGACAACAATAAGAGCAATATTTACCTAGGCAGAACAAGCCCATCAAATGTTGTGAGAGCTTACTATGAGCAATATCAAAGAGATTTCTCTCTTTTTCTCAAGTGTCGTGCAGAGGAACTAGTTGAAGGAGGTCGAATGATTTTGACAATTATGGGAAGAAGAAGTGATGATCCATCTAGCAAAGATGGTTGCTACATTTGGGAAATTATGGCTACGGCTCTTAATGATATGGTATTGCAGGGAATAATAAAGGAAGAGCAATTGGATACTTTTAACATCCCTTTCTACACTCCATCCCCATCTGAAGTGAAATTGGAAGTTCTTAAAGAAGGTTCATTTGCCATTAATTGTTTAGAGGTGTCTGTAGTGCACTGGAGCGCTTGGGATGAATGGAGTGTTCTTGACTTTGAATCTGAAAGCGGATACAATTTGACACAGAGCATGAGGGCTGTGGCAGAATCTATGCTGGTTAGCCACTTTGGTGAAGCTATCATTGATGAGCTTTTCAGCCGTTACCAAGAAATCTTGGCTGATCGGCGATGGAGAATTTGGTTAGAGAGGGGTTTATACAGCTTCCAATTGATTGGGCATGTTTCATATACATCAAGAGGACAGGGTGTTTTTGACATTTCAACAACAGAGGTAGCAGATTACATAGTTGGAGGTGTAATGGCTTGTGAAAGTTCTCGTTTTGATGCCGTCATAGAGAATAAAGTCCCCTTAGTCTTGAGTGTGGGAGCATTAGACATGGTGAGCTTTGGAGCGAAAGATACCATACCACTAAAGTTTCAGCAGAGAAATATATATGAACACAATAAACAGGTTTCACTTATGCGAACAACAGTAGATGAGAACAGAAAATTTGCAGATTTCATAGCAAATAAATTGAAGAATTCATCATCTATGATTTGTGTTTGCCTTACAGAAAAGTGTGTCTCTGCTTTAGATGCACCCGGGAAGCCTTTTTATGATCCAGAGGCATCGGGAACTCTTCTTCAGTCGTGTATTTTTAAGGTAAAGCCGTATCCTCATCATATTAATGACCTTGAATTTGCAAATGCATTGGTTGATGCATTTTTAGAGATTAATGAGAAAACTAGTAAAGATTCTACTCAGCAACAAGTAGCTAGTCCTGAATCTGTTGAACAATTTCACGAGGATAATGTTTCAAATGCGTCAAGCATTGCAACAATTGTCTATACACCTAGTGAATTCCCAGAAGCAAGGAGAGCAAAAACTTTGGAGAAAACACAGCTTATATTACAGCAACTAAAACATCAGATACGTAAAGGAATTCCTATAATAGGAGCTGGTGCTTGGACTGGTATATCTGCTAAGTTTGAAGAAGCTGGAGGAGTTGATCTAATAGTATTGTACAATTCAGGGCGCTTCCGAATGGCTGGAAGAGGTTCATTAGCTGGATTATTACCTTTTTCCGATGCTAATGCTGTCGTTCTTGACATGGCCAATGAAGTTTTGCCAGTAGTAAAGAAGGTTCCAGTTCTTGCTGGTGTATGTGCAACTGGTCTCTTCCGTAGAATGGATTATTTCCTTAAACAGGTGGAGTCTACTGGATTCTCTGGGTTACAAAATTTTCCTACAGTTGGATTATTTGATGGAAATTTTAGACTAAATCTTGAAGAAACGGGAATGGGATATAGCTTGGAAGTTGAGATGATCCAGAAAGCCCATAAAATGGGTCTCTTTACAACCCCATATGCTTTCAATCAATATGAAGCTATTGAAATGGCTAAAGTTGGCGCCGATATTATAGTGGCCCATATGGGTCTAACTACAACAGGCTCCATAGGTGCAAAAACATCTGTTTCACTTAAAGAAAGTGTAGTTCATGTACAAGCTATTGCAGATGCAGCACATAGGATCAATCCTGGTGTCATCGTGTTGTGCCATGGAGGTCCAATATCTGGTCCAAAAGAGGCAGCATTTGTATTGAAGAGAACCAAAGGAGTTCATGGGTTTTATGGGGCTTCAAGTATGGAAAGACTTCCAGTGGAGCAGGCTATTACAAATACAGTCAAACAGTACAAGTCAATTTCTATTCATTAA 2562 0.3915 MEVAKVLHMNGGVGDASYANNSFVQQKLICLTKPLREEAIKSLYCGTLPRRLAMADLGCSSGQHALIVVSDFIKTVEKLCLELNHKSPEYKVFFNDLPGNDFNNIFKSLDSFKQKLCEEMESGIGPCYFFGAPGSFYGRIFSNQSVHFIHSSYSLQWLSKVPECIDNNKSNIYLGRTSPSNVVRAYYEQYQRDFSLFLKCRAEELVEGGRMILTIMGRRSDDPSSKDGCYIWEIMATALNDMVLQGIIKEEQLDTFNIPFYTPSPSEVKLEVLKEGSFAINCLEVSVVHWSAWDEWSVLDFESESGYNLTQSMRAVAESMLVSHFGEAIIDELFSRYQEILADRRWRIWLERGLYSFQLIGHVSYTSRGQGVFDISTTEVADYIVGGVMACESSRFDAVIENKVPLVLSVGALDMVSFGAKDTIPLKFQQRNIYEHNKQVSLMRTTVDENRKFADFIANKLKNSSSMICVCLTEKCVSALDAPGKPFYDPEASGTLLQSCIFKVKPYPHHINDLEFANALVDAFLEINEKTSKDSTQQQVASPESVEQFHEDNVSNASSIATIVYTPSEFPEARRAKTLEKTQLILQQLKHQIRKGIPIIGAGAWTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFSDANAVVLDMANEVLPVVKKVPVLAGVCATGLFRRMDYFLKQVESTGFSGLQNFPTVGLFDGNFRLNLEETGMGYSLEVEMIQKAHKMGLFTTPYAFNQYEAIEMAKVGADIIVAHMGLTTTGSIGAKTSVSLKESVVHVQAIADAAHRINPGVIVLCHGGPISGPKEAAFVLKRTKGVHGFYGASSMERLPVEQAITNTVKQYKSISIH 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01251 853 Gene3D Aldolase class I 574 828 IPR013785 -
Gma16g01251 853 Gene3D - 6 344 IPR042086 -
Gma16g01251 853 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 583 772 IPR015813 GO:0003824
Gma16g01251 853 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 370 852 - -
Gma16g01251 853 Gene3D Uncharacterised protein family UPF0261, NC domain 365 530 - -
Gma16g01251 853 Gene3D Vaccinia Virus protein VP39 21 289 IPR029063 -
Gma16g01251 853 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 346 IPR029063 -
Gma16g01251 853 Pfam Phosphoenolpyruvate hydrolase-like 585 850 IPR009215 -
Gma16g01251 853 Pfam SAM dependent carboxyl methyltransferase 38 343 IPR005299 GO:0008168
Gma16g01251 853 Pfam Uncharacterised protein family (UPF0261) 370 527 IPR044122 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01251 Gma-Chr16 30635252 30647042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01251 - - gmx:100792647 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01251 16 30635252 30647042 Gma16g01251 16 30635252 30647042 ECH