Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01238 ATGGAGCACTTAGACATTGTGAGTGAAGTGAAGCATCAAAGAATCAAAACCAACGGGATATGGCTACACGTGGCAGAGAAAGGAACAGGTCCACTAGTTCTGCTGCTTCATGGCTTCCCAGAAACATGGTATGCCTGGCGCCACCAGATCAATTTCTTGGCCCATCATGGCTACCATGTGGTTGCACCTGATCTTAGAGGATATGGTGACTCTGATTCTCCTATTGACCCCAGTTCCTACACTATTCACCACCTTGTAGGTGACATCATAGGTTTCCTTGATCATTTTGGTCAACATCAGGAACCTGGTAGAGCAGAGAGGGCTTTTGCTAGATATGATTATTTGACAGTGATGAAGAAGTTTTTGCTGATAACACGGACAGATTTTCTAGCATCTCCACCGGGCATGGAGCTTGTTGATTTCTTGCCAACACCTTCGGTTGTGCCATCATGGATAACCGAGGAAGAACTCATGGTCTTTGCAGACAAATTCCAAGAGTCTGGTTTCACTGGTCCACTCAATTATTACCGTGCAATGGACTTAAACTGGGAGCTTCTTGCACCATGGCAAGGATCAAAGCTAACAGTTCCAACGAAGTTCGTAGCAGGAGACAAAGACATCGGTTTTGAAACAGCGGGTACAAAGGCTTTTGTGGAAAGTGATATTTTCAAGAGCCTAGTTCCCAACCTTGAAGTGGTTATACTAGACGGCCACCATTTTATTCATCAAGAAAAAGCCCAACAAGTTTCACATGAAATCCTTTCCTTCATCCGTAAATTATCCCCCAATGCTTCCATATAA 801 0.4419 MEHLDIVSEVKHQRIKTNGIWLHVAEKGTGPLVLLLHGFPETWYAWRHQINFLAHHGYHVVAPDLRGYGDSDSPIDPSSYTIHHLVGDIIGFLDHFGQHQEPGRAERAFARYDYLTVMKKFLLITRTDFLASPPGMELVDFLPTPSVVPSWITEEELMVFADKFQESGFTGPLNYYRAMDLNWELLAPWQGSKLTVPTKFVAGDKDIGFETAGTKAFVESDIFKSLVPNLEVVILDGHHFIHQEKAQQVSHEILSFIRKLSPNASI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01238 266 Gene3D alpha/beta hydrolase 98 262 IPR029058 -
Gma16g01238 266 Pfam alpha/beta hydrolase fold 31 100 IPR000073 -
Gma16g01238 266 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 98 261 - -
Gma16g01238 266 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 3 100 - -
Gma16g01238 266 PRINTS Epoxide hydrolase signature 37 55 IPR000639 GO:0003824
Gma16g01238 266 PRINTS Epoxide hydrolase signature 57 72 IPR000639 GO:0003824
Gma16g01238 266 SUPERFAMILY alpha/beta-Hydrolases 8 259 IPR029058 -
Gma16g01238 266 PANTHER EPOXIDE HYDROLASE 3 100 - -
Gma16g01238 266 PANTHER EPOXIDE HYDROLASE 98 261 - -
Gma16g01238 266 Gene3D alpha/beta hydrolase 5 97 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01238 Gma-Chr16 30472879 30475780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01238 6 261 Acyl Lipid Metabolism Gene Families AT3G51000 55.625 3.11e-118 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01238 - - gmx:100809053 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma02g00477 02 4826691 4830505 Gma16g01238 16 30472879 30475780 ECH
Gma16g01238 16 30472879 30475780 Gma16g01238 16 30472879 30475780 ECH