Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01233 TTTGATGATATAGGATCACATGGAACCAAAGTTGTAATATACAATTTGTGGTTGAATGATGAAGGGATATATGAATTGAGTTTTGATGATGATGCTGAGGATATTATGCTGAGAGATGAGGCCAACCATGGAGCTGAGAAAAATTTGAGGAAAAAAACTGTTCAGCTTCAGTCACATATTTCTTACCGCCTTCGTTTTTCTTTACGGGCATATGTTTCGATGTTGTACCTTAGAAAATTTTCTAACTTCTCAATCATACTAAGGGGGAAACTTGTGGATCAATTTAACATTGCGGACGATTTAATATATTCAAAAGTAATTCCATATAAGCCTCAGCTAGCCATGGCAACAAATGAGGCTATAGCGGAGACAAAGACAACCATTGGATTTATAAAGGAGGCTGCAGAAATTAAGGTTACTGGATTTAATGTGTACCACAAAAATCGCCTAATCAAGCCCTTTTGGAAAGTAGTAGCTGATGGTTCTTCAAAAGGGCGTTGTGTTGTTGGGGTTCTTGAAGCCAATTTCATAGAACCAGCGCATGACAAGCAGGATTTTGAGAGATCGGTGCTGTTCATTCGGTTGGAAAACAAGCTGAAACAAATGACAATGGATTACTGGAGAGATCACTGTCACTTGATTGGATATCAGCCACTAAATTTCAAGTCACAAAAAAATGTAGTAAAAGAAGCCCACATTCGAAAATCAGCTCAACATTCAATTAATCCACAGAATCAGTTGCTTGCTGATCAACAGGATACTAGCTTGGTAGCTGAGCATCAAAGCGACCTGAGTCAGCCAATTGTGGGTCTTGCAGTGATTGGCATGCAAGGTTCGAGTCGTGAGCAGCTTGGTACGATGCTAGAAACTCCAGTGTCTGTATCTCCTGATGAAATCTGTGCAGAAAACATAAAACTTTTCGAGAGGTGTGAGGAGTACAGGGAAAAGGAGACAGAATTGAAACAGACGGTTGTGGACTTAGAGGAGGAATTGAAACAAATCAAGAAGAAATGTGATCTTCTATCTTCACTCTTAGAGACTAAGAGGAAGGCGAAGAGTGTTAAGGGATGA 1071 0.3968 FDDIGSHGTKVVIYNLWLNDEGIYELSFDDDAEDIMLRDEANHGAEKNLRKKTVQLQSHISYRLRFSLRAYVSMLYLRKFSNFSIILRGKLVDQFNIADDLIYSKVIPYKPQLAMATNEAIAETKTTIGFIKEAAEIKVTGFNVYHKNRLIKPFWKVVADGSSKGRCVVGVLEANFIEPAHDKQDFERSVLFIRLENKLKQMTMDYWRDHCHLIGYQPLNFKSQKNVVKEAHIRKSAQHSINPQNQLLADQQDTSLVAEHQSDLSQPIVGLAVIGMQGSSREQLGTMLETPVSVSPDEICAENIKLFERCEEYREKETELKQTVVDLEEELKQIKKKCDLLSSLLETKRKAKSVKG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01233 356 Coils Coil 310 344 - -
Gma16g01233 356 PANTHER PROTEIN MICRORCHIDIA 1-RELATED 1 353 - -
Gma16g01233 356 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 353 IPR045261 GO:0016887
Gma16g01233 356 Pfam Morc6 ribosomal protein S5 domain 2-like 66 207 IPR041006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01233 Gma-Chr16 30334661 30363193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01233 - - gmx:100781431 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01233 16 30334661 30363193 Gma16g01233 16 30334661 30363193 ECH
Gma16g01233 16 30334661 30363193 Gma02g00473 02 4747595 4766298 GST