Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01230 ATGGAACCCTGGCTTCCCCAAGACGATTTTCTCCTAAAAAACGCCATTGAGGGCGGAGCGTCGTTGGAATCGCTGGCGAAAGGAGCGGTTCGGTTCTCGCGGCGGTTTTCCGTTACCGAATTGCGGGATCGGTGGCAGGCGCTGCTGTACGACCCGGACGTTTCCGCCGCGGCGAGAGCTGCGATGGCGAATTTGGAGCTGACAAAGTACGGGGGAGGCACGGGGACCGGCGAAGGTGGTGGTGGGAAGAAGAGGAACTCTGAAAGCATTCGGAAGCATTATTCTGCAATGCAGAAAAGACTGCGCCGGTGCCGGCACGGTGTGGCGGGTTCCGATGCAAAGAACGCGACTGAAGGGTGTGATGGTAAAAGTCACGGTTTGGAAGGGAGAGTGAATTTGAAAGGCGAGTGTGGCAATGGTGTGCTGAGATTAAATGCTCCTAATGCTGTGTTGAGAGATGATGCCAAGAACGATTTGAAATGTCTCTTCAACTTGGCAAATGAGGATGAGGTTGTCTTTATGGATCTAGTTAGGAAGGAGGTGCTGGCTGCGGATAAGGATAAGCCTAGTTATGATAATGTCGATTCGCTTCTGTTGAGTTCTCCCTGTGATGTTCAGGGTGATGATGATGGCCGTGAGCCATTAGGTGGCGGTTGTGCTGATCAACATTGTGTTTCTGAGTCTGGAAACAATGCTGGATCATCTGGTGCTGTGCAAACTCCTCATGCTGAACAAAGTGAGGGTTTTATGATCTGTGTTCTTAACACCGAGGACACTGACATCCCGAGCAATGACACTACAGATATACCCATTTTAGTTCCTGAGTTGGTGCCTCTAAAATTCCAACCAATTGTTGAAGAGTTGGGTTGTTTGGAGTCTATCATAAATAATAAAAAAAGAAATGAGTCGGATGGAAGCCTGGAGAAAGAAGTTGTTCTTTCTCAGTCTTCTGCAGCTTTGCAAACAGTTCGGCAGGGGTTGGTGCCTAATGTGAATTCAAGCCACCGACCTCTTGTTCTTGGACTGAAAAGTGAAAATCCAGGGAGAAACTCGATATCTGCAGTTTCTAGACAGAATAACAATGTCAATGTCAACATCAACTCAAGACATAGCAGATTAGTTCGTGCAACTGTGATGCCTGCCTCAGATGGACATCTGAAACAAGAGGAAACAAATGCTCCATCTTCTGTACATGCAAAAGCTGAGGAACATAAGGCTTTATCTAAATCAGAAGCAAAACCGTTATCTCTTGATCATGAAGGAGGTGATATTGAAGATGGCGACGATAATGATAATGATGATGAACTTCCTAACTTTTCTGATGTTGAGGAAATGATTCTTGAAATGGATTTATCTCCAATGGATCAAGAGACAAATGCTAGTAGAGAAGTCTTGCGATATCAACTTGATGAAAGTAAGAGGACTATAATGAGATTGGAGCAAAGTGCTCAGTCCTCTATGGGAAGAGCAATTTCATCCCAGGGTGCATTTGCCGTAGTGTATGGGCGCATCCTTGAGAAATACATTAAAACAAGCAAGGTTATACTTGGTAGAGCAACAAATGATGTACATGTTGATATTGACTTGGGGAAAGAAGGGCAAGTGGCTACCAGAATATCTAGAAGACAGGCTGTAATAAAGTTGGAAGCAGATGGTTCTTTCATTATTAAAAATCTTGGCAAGAGATGTATCTTCTTGAATGGAAAAGAAATTGCTACAGGACAAGTGCGGGGTCTTAGTGCTGGTAGTTTGATCGAGATTTTAGGCATTCCACTCATCTTTGAGACCAATAATAGTTGCGTGAGGAAGTTTTTAGAAAATGAGAATGAAAAGAGATGA 1839 0.4464 MEPWLPQDDFLLKNAIEGGASLESLAKGAVRFSRRFSVTELRDRWQALLYDPDVSAAARAAMANLELTKYGGGTGTGEGGGGKKRNSESIRKHYSAMQKRLRRCRHGVAGSDAKNATEGCDGKSHGLEGRVNLKGECGNGVLRLNAPNAVLRDDAKNDLKCLFNLANEDEVVFMDLVRKEVLAADKDKPSYDNVDSLLLSSPCDVQGDDDGREPLGGGCADQHCVSESGNNAGSSGAVQTPHAEQSEGFMICVLNTEDTDIPSNDTTDIPILVPELVPLKFQPIVEELGCLESIINNKKRNESDGSLEKEVVLSQSSAALQTVRQGLVPNVNSSHRPLVLGLKSENPGRNSISAVSRQNNNVNVNINSRHSRLVRATVMPASDGHLKQEETNAPSSVHAKAEEHKALSKSEAKPLSLDHEGGDIEDGDDNDNDDELPNFSDVEEMILEMDLSPMDQETNASREVLRYQLDESKRTIMRLEQSAQSSMGRAISSQGAFAVVYGRILEKYIKTSKVILGRATNDVHVDIDLGKEGQVATRISRRQAVIKLEADGSFIIKNLGKRCIFLNGKEIATGQVRGLSAGSLIEILGIPLIFETNNSCVRKFLENENEKR 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01230 612 Pfam FHA domain 514 587 IPR000253 GO:0005515
Gma16g01230 612 Coils Coil 462 482 - -
Gma16g01230 612 ProSiteProfiles Forkhead-associated (FHA) domain profile. 514 571 IPR000253 GO:0005515
Gma16g01230 612 PANTHER FHA DOMAIN PROTEIN 2 111 - -
Gma16g01230 612 PANTHER FHA DOMAIN PROTEIN 129 611 - -
Gma16g01230 612 SUPERFAMILY SMAD/FHA domain 505 595 IPR008984 GO:0005515
Gma16g01230 612 MobiDBLite consensus disorder prediction 396 421 - -
Gma16g01230 612 PANTHER MICROSPHERULE PROTEIN 1 2 111 IPR037912 GO:0002151|GO:0031011|GO:0071339
Gma16g01230 612 PANTHER MICROSPHERULE PROTEIN 1 129 611 IPR037912 GO:0002151|GO:0031011|GO:0071339
Gma16g01230 612 MobiDBLite consensus disorder prediction 422 437 - -
Gma16g01230 612 CDD FHA 510 595 IPR000253 GO:0005515
Gma16g01230 612 MobiDBLite consensus disorder prediction 381 437 - -
Gma16g01230 612 MobiDBLite consensus disorder prediction 69 89 - -
Gma16g01230 612 Pfam N-terminal region of micro-spherule protein 4 66 IPR025999 -
Gma16g01230 612 SMART FHA_2 513 571 IPR000253 GO:0005515
Gma16g01230 612 Gene3D - 452 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01230 Gma-Chr16 30219369 30223629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01230 - - gmx:100779823 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01230 16 30219369 30223629 Gma16g01230 16 30219369 30223629 ECH
Gma02g00469 02 4690796 4694597 Gma16g01230 16 30219369 30223629 ECH
Gma16g01230 16 30219369 30223629 Gma02g00469 02 4690796 4694597 GST