Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01229 ATGTTCCTTCTCATTTTCTCAACTTTAACCTCAATTTCAGAGCCATGTCACATGGTGGACAAAGAAGCATTACTAGAATTCAAGAGCAGGATCATCTCTGACCCTTCAAAACTGCTGCATTCTTGGACACCTTCCTCTGACTGTTGCCACAATTGGGAAGGCATCGCATGTGGTTCCACCGGCAGGGTCATCAGCCTCACTCGAACTGGTGTAGTGTACGACGTCGATGACATCCCTCTAGAAACATACATGTCAGGAACGTTATCACCTTATCTTGGAAACTTGTCAGGTTTGCAAGTTTTGGACCTTAGCAATCTGAAGCAGTTGCATGGTCCAATGCCTCCAGAACTGGCCAAGTTATCCCACTTGAGAAAACTTTTTCTCTACTCAAACAAGTTCACTGGTGGCATTCCAGCAACATTCCAAAACCTTTCACGGCTTGAAAATTTGTACCTTGACAACAACCAATTATCTGGTAATGTTCCTTCTTCTGTCTTTGCCTCATTGAAATATCTTTCAGAACTTAGTCTATCTGGGAACAAGCTTTCTGGGAGGATTCCTTCTTCCATTGGAAGCATGGTGTTTCTCACTAGGCTTGATATTCACCAAAACAATTTCCATGGCAACATTCCTTTTAGCATTGGCAATCTTGTGAATCTCAAGGGCTTGGATTTCTCATATAATCAGATTAGTGGAAGAATTCCAGAGTCAATTGGGAGGCTCTCGAATTTGGTTTTTCTAGATCTGATGCATAATAGGGTCATTGGGAGCCTCCCTTTTCCTATTGGGGATTTAATTTCTCTAAAGTTTTGCAGGTTATCAGAAAACATGCTAAATGGCATTTTGCCTTATTCCATTGGAAAACTCAAGAATGTGCAAAGGCTAATTCTTGAGAACAACAAACTCACTGGGATGTTACCTGCCACCATTGGCCATCTAACCAGCTTAACCGATTTATTTCTTACAAACAATGAATTCAGTGGCGAAATTCCACCTTCCTTTGGCAATTTAATTAACCTTCAAACACTTGATTTGTCAAGGAACCAACTTTCTGGTGAACTTCCTCATCAACTTGCTAAACTAGATAGTTTGCAAACCTTAGACTTGTCATTCAACCCACTAGGACTAGCCAAAGTACCCAAATGGTTTTCCAAATTGAGAGTTTTTCAGTTAAAATTGGCTAACACAGGGATTAAAGGCCAACTTCCACAGTGGCTCTCATATTCATCCGTGGCAACCCTTGATTTGTCAAGCAATGCATTAACGGGGAAATTGCCTTGGTGGATTGGAAACATGACTCACCTTTCCTTCCTGAACCTCTCAAACAACGAGTTTCATTCGTCCATCCCGGTGACATTCAAGAACCTCTCTTCTCTGATGGACCTTGATCTTCACTCCAATAAGCTCACAGGCTCTCTCAGAGTGGTGTTTGAGAAAGAGGTTCAGTTTTCACTAGGCCATTTCAACACCATTGACCTATCCAACAACAAGTTTTGTGGCCCCATCGGTGAGAACATTGGAGAAAAGGCCTCAATGAGTTCAATTAAATTTCTTGCATTGTCACACAACCCTTTGGGAGGATCTATACCACAGTCAATTGGGAAACTGAGAGAATTGGAGGTTCTGGACCTTGAGGACAGTGAGCTCTTGGGGAACATACCTGAAGAACTTGGTTCTGTTGAAACGTTAACAAAGATTAACCTTTCAAAGAACAAGTTAAGTGGCAACATACCGGACAAGGTCATAAATTTGAAGAGGCTTGAAGAGTTTGATGTGTCAAGGAACCGACTCAGAGGGAGGATCCCTCCACATACGGCCATGTTCCCTATATCAGCTTTTGTTGGTAATCTTGGACTGTGTGGGCCACCACTTCCTCCTTGTAAACTTTGCTAA 1893 0.4216 MFLLIFSTLTSISEPCHMVDKEALLEFKSRIISDPSKLLHSWTPSSDCCHNWEGIACGSTGRVISLTRTGVVYDVDDIPLETYMSGTLSPYLGNLSGLQVLDLSNLKQLHGPMPPELAKLSHLRKLFLYSNKFTGGIPATFQNLSRLENLYLDNNQLSGNVPSSVFASLKYLSELSLSGNKLSGRIPSSIGSMVFLTRLDIHQNNFHGNIPFSIGNLVNLKGLDFSYNQISGRIPESIGRLSNLVFLDLMHNRVIGSLPFPIGDLISLKFCRLSENMLNGILPYSIGKLKNVQRLILENNKLTGMLPATIGHLTSLTDLFLTNNEFSGEIPPSFGNLINLQTLDLSRNQLSGELPHQLAKLDSLQTLDLSFNPLGLAKVPKWFSKLRVFQLKLANTGIKGQLPQWLSYSSVATLDLSSNALTGKLPWWIGNMTHLSFLNLSNNEFHSSIPVTFKNLSSLMDLDLHSNKLTGSLRVVFEKEVQFSLGHFNTIDLSNNKFCGPIGENIGEKASMSSIKFLALSHNPLGGSIPQSIGKLRELEVLDLEDSELLGNIPEELGSVETLTKINLSKNKLSGNIPDKVINLKRLEEFDVSRNRLRGRIPPHTAMFPISAFVGNLGLCGPPLPPCKLC 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01229 630 SUPERFAMILY L domain-like 391 627 - -
Gma16g01229 630 SMART LRR_typ_2 512 536 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 432 455 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 120 143 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 456 479 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 169 193 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 289 312 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 217 241 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 584 615 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 144 168 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 313 336 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 361 385 IPR003591 -
Gma16g01229 630 SMART LRR_typ_2 337 360 IPR003591 -
Gma16g01229 630 SUPERFAMILY RNI-like 87 473 - -
Gma16g01229 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 628 - -
Gma16g01229 630 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 2 628 - -
Gma16g01229 630 PRINTS Leucine-rich repeat signature 340 353 - -
Gma16g01229 630 PRINTS Leucine-rich repeat signature 361 374 - -
Gma16g01229 630 Gene3D Ribonuclease Inhibitor 283 379 IPR032675 -
Gma16g01229 630 Gene3D Ribonuclease Inhibitor 187 282 IPR032675 -
Gma16g01229 630 Gene3D Ribonuclease Inhibitor 18 186 IPR032675 -
Gma16g01229 630 Pfam Leucine rich repeat 196 253 IPR001611 GO:0005515
Gma16g01229 630 Pfam Leucine rich repeat 333 374 IPR001611 GO:0005515
Gma16g01229 630 Pfam Leucine rich repeat 273 325 IPR001611 GO:0005515
Gma16g01229 630 Pfam Leucine rich repeat 121 182 IPR001611 GO:0005515
Gma16g01229 630 Gene3D Ribonuclease Inhibitor 380 630 IPR032675 -
Gma16g01229 630 Pfam Leucine rich repeat N-terminal domain 20 57 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01229 Gma-Chr16 30192553 30194445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g01229 3 629 Receptor kinase-like Gene Family AT4G08850 34.904 1.64e-92 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01229 - - gmx:102664464 1207.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01229 16 30192553 30194445 Gma16g01229 16 30192553 30194445 ECH