Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01223 ATGAAACAAGAGGAATGGATGATTACGACAGCGTTGCTATCGTTGCTGTTTGTTTCATCTTTTCCGCCGTTGAGTTACGGAGTTGTTCCTCCTCGTACTCTGCTCAATAAGCTGTCGGAGGGCAAATATCTCAACACTCAGGAGCTCTGGTTCGACCAAACCCTCGATCACTTCTCTCCCTATGATCACCGACAATTCCGGCAACGTTACTATGAGTTTCTAGACTATTTCCGGATTCCCGATGGACCAATTTTTTTGGTAATAGGTGGTGAAGGTATATTGAATGGGGTAGCAAATGACTATCTTGCTGTACTGGCAAAGAAGTTTGGAGCAGCTATGGTTACTCTTGAACATCGCTACTACGGAAAGAGTACTCCATTTAATTCTTTGGAGACAGAAAATTTGAAATATCTTTCGTCCAAGCAGGCACTCTCTGATTTGGCTGTTTTTCGGCAGTATTATCAGGACTCCATAAATGCAAAGCTTAATAGAACAAAAATTGAAAACCCCTGGTTCATTTTTGGTGGTTCATATTCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCCCATTTAACATGTGGAAGTCTGGCTAGTTCTGCAGTTGTTCTTGCTGTTTATAACTACACAGAATTTGATCAGCAGATTGGTGAGTCGGCAGGTCCTGAATGTAAAGAAGCGCTGCAAGAAACTACTCAACTCATTGAACACAAACTTGCAACCAGTGGAAAGGAATTGAAGGCCTCTTTTGATGCTGCTGATCTTGAAATAGATGGAGACTTTTTTTATTTCTTGGCTGATGCTACTGCTATAGCGTTTCAATATGGAAATCCAGATAAAGTATGCAAGCCTCTTGTTGAAGCAAAGAAGGCTGGAGAGGACTTGGTGGATGCTTATGCCAAATATGTCAAAGAGTACTACATTGGAACTTTTGGTACTGATGTGCAGACATATGATCAGAAGTACTTGAAAAGAACTGCTATGAACGAGGACAATTCTGCTCGATTATGGTGGTTTCAAGTTTGCACTGAAGTTGCATACTTTCAGGTGGCTCCCTCAAATGACAGTATTCGCTCCTCAAAAGTGGACATAAAATACCATTTGGACCTTTGCAAAAATGTCTTTGGAGAGGGCATCTTTCCTGATGTTGATGCAACTAATTTATACTACGGAGGCACTAAAATTGCTGGTTCAAAAATAATATTTACAAATGGCTCACAAGATCCTTGGCGCCATGCATCCAAGCAAACTTCATCTCCTGATATGCCTTCCTACATCGTCAAATGTTACAATTGTGGCCACTGTTCTGATTATCGAGGATGTCCTCAATTCCCTTTCTCCATTGAAGGTAATGAGAAAAACTGCACCTCTCCTGATGCAGTTCACAAAGTAAGGCAAAAGATTTCAGAACATATGGACTTGTGGTTATCTGAATGCGTCGACACAGGCAGAAGTTTTATATGA 1467 0.4124 MKQEEWMITTALLSLLFVSSFPPLSYGVVPPRTLLNKLSEGKYLNTQELWFDQTLDHFSPYDHRQFRQRYYEFLDYFRIPDGPIFLVIGGEGILNGVANDYLAVLAKKFGAAMVTLEHRYYGKSTPFNSLETENLKYLSSKQALSDLAVFRQYYQDSINAKLNRTKIENPWFIFGGSYSGALSAWFRLKFPHLTCGSLASSAVVLAVYNYTEFDQQIGESAGPECKEALQETTQLIEHKLATSGKELKASFDAADLEIDGDFFYFLADATAIAFQYGNPDKVCKPLVEAKKAGEDLVDAYAKYVKEYYIGTFGTDVQTYDQKYLKRTAMNEDNSARLWWFQVCTEVAYFQVAPSNDSIRSSKVDIKYHLDLCKNVFGEGIFPDVDATNLYYGGTKIAGSKIIFTNGSQDPWRHASKQTSSPDMPSYIVKCYNCGHCSDYRGCPQFPFSIEGNEKNCTSPDAVHKVRQKISEHMDLWLSECVDTGRSFI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01223 488 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 15 483 - -
Gma16g01223 488 Gene3D Serine carboxypeptidase S28, SKS domain 209 362 IPR042269 -
Gma16g01223 488 Pfam Serine carboxypeptidase S28 53 440 IPR008758 GO:0006508|GO:0008236
Gma16g01223 488 PANTHER OS10G0511600 PROTEIN 15 483 - -
Gma16g01223 488 Gene3D alpha/beta hydrolase 50 441 IPR029058 -
Gma16g01223 488 SUPERFAMILY alpha/beta-Hydrolases 111 370 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01223 Gma-Chr16 30047075 30052850 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01223 - - gmx:100805858 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01223 16 30047075 30052850 Gma16g01223 16 30047075 30052850 ECH
Gma16g01223 16 30047075 30052850 Gma02g00460 02 4639225 4643148 GST