Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01205 ATGAGTATGTTGAAAGGAGGTGAAATGGGTGGAGAAGGAGGGAGAGAAGGGGATTGGGAGTGCAGCAGTTGCAACAACAGGAACTACGCCTTCAGATCATTCTGCAACAGATGCAAGCAACCCCGCCTCCTCGTCGATTCCAAAACCCCCGCTGATTCCAAGTGGCTCCCCCGTATCGGCGATTGGATCTGCACCGGTTGCACTAACAACAATTATGCATCAAGAGAGAAGTGCAAGAAGTGCGGACAACCAAAGGAGGTAGCAGCCATGCCAGCAATTGCGATGACCGGAGCATCTTTCCCCACTTATTCACACTATTTTTCCAGGGCCCCAGGAGTACCAGAACAAAAGATGAATATTGGATTGCTTGGCAATGGTGCACCATCACAGTCACTGCATTTAAACTCCAATTGGCCTGTTCCTGGAGCAGATAAGTACGGTGTCCAGCCACTTTCCATATGGCTACCTGGTGGAAATTATGGCACTGTGCATCATCATGAAAATTCTACCAACCAGAACCTATCTGTTCCAAAGGGATGGCGCAATGGGGACTGGATCTGTAACTGTGGCTTCCACAATTACTCATCCCGCTCTCAGTGTAAAAAGTGCAATGCTTTTCCTCCTGCACTTGGGACAAAGCGGTTAGCTTCAGAAGAGTTGGTTTATGATTGGGACAACAAGAGATTGAATATAGGAACTACAAATGATCAGCATCAAATATATACAAGTTTAGAGCAAGTGGTAGGGACAGGTGCAGATCCAAAACCTGGACTCTTCCCCTCTTATCCCAGCATGAACTCAACTACAGCTCCAAGTTTGCCATTGGCCACATGGCTTCCACCTCAAGCTTCTGCACCTGCCCTCCTTGGAAAAGGAGCAAGGCAATGGCGAAGTGGAGATTGGATGTGCTCAAATTGCAACAATCATAATTATGCTTCAAGACTACAGTGTAACAGGTGCAAAACTCAAAGAATGGCTCCCATGCAACCTGTTAATGTTGTGTAA 1005 0.4706 MSMLKGGEMGGEGGREGDWECSSCNNRNYAFRSFCNRCKQPRLLVDSKTPADSKWLPRIGDWICTGCTNNNYASREKCKKCGQPKEVAAMPAIAMTGASFPTYSHYFSRAPGVPEQKMNIGLLGNGAPSQSLHLNSNWPVPGADKYGVQPLSIWLPGGNYGTVHHHENSTNQNLSVPKGWRNGDWICNCGFHNYSSRSQCKKCNAFPPALGTKRLASEELVYDWDNKRLNIGTTNDQHQIYTSLEQVVGTGADPKPGLFPSYPSMNSTTAPSLPLATWLPPQASAPALLGKGARQWRSGDWMCSNCNNHNYASRLQCNRCKTQRMAPMQPVNVV 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01205 334 ProSiteProfiles Zinc finger RanBP2 type profile. 297 326 IPR001876 -
Gma16g01205 334 SMART zf_4 299 323 IPR001876 -
Gma16g01205 334 SMART zf_4 17 41 IPR001876 -
Gma16g01205 334 SMART zf_4 183 206 IPR001876 -
Gma16g01205 334 SMART zf_4 60 84 IPR001876 -
Gma16g01205 334 Pfam Zn-finger in Ran binding protein and others 15 42 IPR001876 -
Gma16g01205 334 Pfam Zn-finger in Ran binding protein and others 297 324 IPR001876 -
Gma16g01205 334 Pfam Zn-finger in Ran binding protein and others 58 86 IPR001876 -
Gma16g01205 334 SUPERFAMILY Ran binding protein zinc finger-like 14 43 IPR036443 -
Gma16g01205 334 PANTHER ZINC FINGER PROTEIN 178 240 - -
Gma16g01205 334 PANTHER ZINC FINGER PROTEIN 281 333 - -
Gma16g01205 334 PANTHER ZINC FINGER PROTEIN 10 145 - -
Gma16g01205 334 ProSiteProfiles Zinc finger RanBP2 type profile. 58 87 IPR001876 -
Gma16g01205 334 ProSiteProfiles Zinc finger RanBP2 type profile. 15 44 IPR001876 -
Gma16g01205 334 SUPERFAMILY Ran binding protein zinc finger-like 52 86 IPR036443 -
Gma16g01205 334 ProSitePatterns Zinc finger RanBP2-type signature. 301 320 IPR001876 -
Gma16g01205 334 SUPERFAMILY Ran binding protein zinc finger-like 291 326 IPR036443 -
Gma16g01205 334 PANTHER OS04G0110600 PROTEIN 10 145 - -
Gma16g01205 334 PANTHER OS04G0110600 PROTEIN 281 333 - -
Gma16g01205 334 PANTHER OS04G0110600 PROTEIN 178 240 - -
Gma16g01205 334 ProSitePatterns Zinc finger RanBP2-type signature. 62 81 IPR001876 -
Gma16g01205 334 ProSitePatterns Zinc finger RanBP2-type signature. 19 38 IPR001876 -
Gma16g01205 334 Gene3D - 175 209 - -
Gma16g01205 334 Gene3D - 291 327 - -
Gma16g01205 334 Gene3D - 52 87 - -
Gma16g01205 334 Gene3D - 14 43 - -
Gma16g01205 334 SUPERFAMILY Ran binding protein zinc finger-like 178 206 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01205 Gma-Chr16 29672706 29676176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01205 - - gmx:100801066 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01205 16 29672706 29676176 Gma16g01205 16 29672706 29676176 ECH