Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01188 ATGGCTGACATAGTGAAGCAACTGTTGGCAAAGCCGATCCAGCTGGCGGACCAAGTGGCCAAGGCAGCGGAAGAGGCCAGTTCCTCCTTCAAGCAAGAGTGTTTAGAGCTGAAATCCAAGACGGAGAAGCTGGCCGGGCTGCTCCGGCAGGCGGCCCGTGCCAGCTCCGACCTCTACGAGCGGCCCACGCGGCGCATCATCGCCGACACCGAACTGGTCCTCGACAAGGCCCTCTCTCTAACCCTAAAGTGCCGCGCCAACGGCCTCATGAAACGCGTCTTCAGCATCATCCCCGCCGCCGCCTTCCGCAAGATGTCCTCCCAGCTGGAGAACTCCATCGGCGATGTCTCCTGGCTCCTCCGCGTCTCCGCCCCCGCCGAGGACCGCGCCGACACCGAGTACCTCGGTCTCCCCCCCATCGCCGCCAACGAGCCCATCCTCGGCCTCATCTGGGAGCAGGTCGCCATCCTCCACACCGGCTCCCTCGACGACCGCTCCGACGCCGCCGCCTCCCTCGTGTCGCTCGCACGTGACAACGACCGCTACGGCAAATTAATCATCGAGGAAGGCGGCGTCGGTCCCTTACTGAAGCTTATCAAAGAAGGCAAAAAAGAAGGGCAAGAGAACGCCGCAAGAGCAATTGGGCTTCTCGGCCGTGACCCTGAGAGCGTGGAACTCATGATCCACGCTGGTGTTTGCTCTGTCTTCGCCAAAGTCCTCAAAGAAGGTCCCATGAAAGTGCAAGCCGTGGTGGCTTGGGCCGTGTCGGAATTAGCTGCGAAATACCCTACATGCCAAGATCTTTTCGCTCAGCATAACATCGTTCGGTTGCTTGTAAGTCATCTTGCGTTTGAAACCGTTCAGGAGCATAGTAAATACGCCATTGTTAGCAACAAACCTACATCAATTCATGCTGTTGTGATGGCTAGTAATAATAGTGGTAATAATTCTAATGGCAATAGTAGTGTGAAGAAGGATAGTGAAGATGAGGAGAAGCAGATGCAGAGTAGGATGCAGCATCCCTTGGGTGATAGGTCAACAAATCAGATGCATAGAGTGGTCACAAGTACCATGGCAATGCATGCTGCCAACAAGCAGCAACAGCCCAATCAAGGGAATGAAGGAACTCTGAACTTGCAGGGTCCGAAAGTGAATGGTAATGGCAAACAAAACCATCAGTCTCACCAGCAAAGCTTCTCGTATTCCGGGATTAACATGAAGGGGAGGGAACTTGAGGACCCTGAGAATAAGGCCTACATGAAAGCAATGGCCGCGAGGGCGCTCCGGCAGCTGGCCAAGGGTAATGTGGCCATTTGCCGGAGCATCACGGAGTCCAGGGCTCTGTTGTGCTTTGCCATACTGCTTGAGAAAGGGTCTGAGGATGTGAAGTACAACTCTGCCCTGGCAGTGAAGGAGATCACGGCAGTGGCAGAGAAAGATGCTGAATTGAGAAGATCGGCATTCAAGCCGAATTCTCCGGCCTGCAAGGCGGTTGTTGATCAAGTGCTTAAGATCATAGAGAAGGAAGATACAAAACTCTTGATTCCTTGCGTAAAGGCTATTGGGAATCTGGCAAGGACGTTCCGAGCAACGGAGACGAGGATAATCGGTCCCTTGGTCCGGCTTCTTGACGAAAGAGAGGCTGAAGTGTCTAGGGAAGCAGCTATCTCTCTCACGAAATTTGCTTCCTCGGAAAACTACCTCCACCTTGATCACTCCAAGGCAATCATAAGTGCCGGTGGTGCGAAACACTTGGTCCAGCTTGTGTATCTTGGAGAACAGACAGTTCAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTAGGGCTGAGGTGCTTGGAGTGCTTGAATGGGCTTCCAAGCAACCAAACGTGACGCAGGACGAAACCCTCGAGGCATTGTTGCAGGAATCCAAGGGTAGGCTGGAGCTTTACCAGTCTAGAGGTTCAAGAGGATTCCAAAAATTACATCAATAG 2007 0.5346 MADIVKQLLAKPIQLADQVAKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALSLTLKCRANGLMKRVFSIIPAAAFRKMSSQLENSIGDVSWLLRVSAPAEDRADTEYLGLPPIAANEPILGLIWEQVAILHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPTCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNSGNNSNGNSSVKKDSEDEEKQMQSRMQHPLGDRSTNQMHRVVTSTMAMHAANKQQQPNQGNEGTLNLQGPKVNGNGKQNHQSHQQSFSYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVAICRSITESRALLCFAILLEKGSEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEDTKLLIPCVKAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKFASSENYLHLDHSKAIISAGGAKHLVQLVYLGEQTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKQPNVTQDETLEALLQESKGRLELYQSRGSRGFQKLHQ 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01188 668 Gene3D - 3 122 IPR036537 GO:0007166
Gma16g01188 668 SMART arm_5 491 526 IPR000225 GO:0005515
Gma16g01188 668 SMART arm_5 178 219 IPR000225 GO:0005515
Gma16g01188 668 SMART arm_5 435 475 IPR000225 GO:0005515
Gma16g01188 668 SMART arm_5 569 609 IPR000225 GO:0005515
Gma16g01188 668 SMART arm_5 220 260 IPR000225 GO:0005515
Gma16g01188 668 Pfam Armadillo/beta-catenin-like repeat 185 216 IPR000225 GO:0005515
Gma16g01188 668 MobiDBLite consensus disorder prediction 323 338 - -
Gma16g01188 668 Gene3D - 406 654 IPR011989 -
Gma16g01188 668 SUPERFAMILY ARM repeat 155 636 IPR016024 -
Gma16g01188 668 MobiDBLite consensus disorder prediction 309 346 - -
Gma16g01188 668 MobiDBLite consensus disorder prediction 361 397 - -
Gma16g01188 668 PANTHER - 1 663 - -
Gma16g01188 668 PANTHER ARMADILLO REPEAT ONLY 4 1 663 - -
Gma16g01188 668 Gene3D - 151 332 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01188 Gma-Chr16 29472410 29475123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01188 - - gmx:100794693 1259.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01188 16 29472410 29475123 Gma16g01188 16 29472410 29475123 ECH
Gma16g01188 16 29472410 29475123 Gma02g00435 02 4429500 4431434 GST
Gma16g01188 16 29472410 29475123 Gma11g00704 11 5915485 5917922 PCT