Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01187 ATGGCTGCTGCGGTTAGTGCTGCAGTCTCTTTTCCATCCACCAAGTCTACCTCTCTCCCAAGCAGGACCTCCATCATTACCCCAGAGAGAGTTGTATTCAAGAAGGCTTCATTGCAATACAGAGATGTTTGTAGCAGTGGAAGGGTAGTTTCCATCAGAGCTCAAGTCACCACTGAGGCTCCAGCCAAGGTTGAAAAAGAGTCCAAGAAACAGGATGAAGGTGTGGTTGTGAACAAGTTCAAACCCAAGACCCCTTACGTTGGTAGATGCCTGCTCAACACAAAGATCACTGGGGATGATGCTCCAGGAGAAACTTGGCACATGGTCTTCAGCACCGAGGGAGAGATTCCTTACAGAGAAGGACAATCAATTGGGGTAATTCCTGATGGTGTTGACAAGAATGGCAAACCTCATAAACTGAGATTGTATTCTATTGCTAGCAGTGCCATTGGTGATTTTGGAGATTCCAAGACTGTTTCTCTATGCGTGAAACGGCTAGTGTACACAAATGAAAATGGAGAAATTGTCAAGGGAGTCTGCTCAAATTTCTTGTGTGACCTGAAGCCAGGAGCTGAAGTAACAATAACTGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCATCATCATGTTGGGAACCGGAACCGGGATTGCCCCATTTCGCTCATTTTTATGGAAAATGTTCTTTGAGAAACACGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTTTTGGGTGTCCCTACAAGCAGCTCATTGCTATATAAGGAGGAATTTGAGAAGATGCAAGAGAAATATCCTGACAACTTCAGGCTTGACTTCGCTGTGAGCCGAGAGCAAACAAACGAGAACGGAGAGAAGATGTACATCCAAACCCGAATGGCTCAATATGCAGAAGAGCTGTGGGAATTACTGAAGAAGGATAACACTTTTGTGTACATGTGTGGACTAAAAGGAATGGAAAAGGGTATTGATGACATTATGGTGTCATTGGCTGCCAAAGATGGCATTGATTGGACTGAGTACAAGAGGCAATTGAAGAAATCAGAGCAATGGAATGTCGAAGTCTATTAA 1089 0.4408 MAAAVSAAVSFPSTKSTSLPSRTSIITPERVVFKKASLQYRDVCSSGRVVSIRAQVTTEAPAKVEKESKKQDEGVVVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSTEGEIPYREGQSIGVIPDGVDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVTITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMQEKYPDNFRLDFAVSREQTNENGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWTEYKRQLKKSEQWNVEVY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01187 362 PIRSF Frd-NADP+_RD 1 362 IPR015701 GO:0016491
Gma16g01187 362 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 83 205 IPR017927 GO:0016491
Gma16g01187 362 Pfam Oxidoreductase NAD-binding domain 215 329 IPR001433 GO:0016491
Gma16g01187 362 PANTHER FERREDOXIN--NADP REDUCTASE, LEAF ISOZYME 1, CHLOROPLASTIC 1 362 - -
Gma16g01187 362 CDD CYPOR_like_FNR 78 362 - -
Gma16g01187 362 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 203 362 IPR039261 -
Gma16g01187 362 PIRSF FNR-PetH 1 362 IPR035442 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 118 128 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 141 148 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 178 187 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 214 233 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 244 253 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 256 267 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 292 308 IPR001709 GO:0016491
Gma16g01187 362 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 316 324 IPR001709 GO:0016491
Gma16g01187 362 Gene3D - 200 362 IPR039261 -
Gma16g01187 362 SUPERFAMILY Riboflavin synthase domain-like 62 206 IPR017938 -
Gma16g01187 362 Gene3D Translation factors 53 199 - -
Gma16g01187 362 PANTHER - 1 362 IPR015701 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01187 Gma-Chr16 29462496 29466067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01187 K02641 - gmx:100793840 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01187 16 29462496 29466067 Gma16g01187 16 29462496 29466067 ECH
Gma02g00434 02 4421207 4424429 Gma16g01187 16 29462496 29466067 ECH
Gma16g01187 16 29462496 29466067 Gma02g00434 02 4421207 4424429 GST
Gma11g00705 11 5930670 5933841 Gma16g01187 16 29462496 29466067 PCT
Gma16g01187 16 29462496 29466067 Gma11g00705 11 5930670 5933841 PCT