Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01171 ATGGGTTGCTGCTGGCATTCAAGAATAGCCAGGGAAGAAACGGCACTGTCGCATTGCAAGGCCAGGAAGCGTTGCATGAAGCACTTTGTTGAAGCACGACACTCCTTTTCATCGTCACACTCCATGTACATTCGCTCTCTTCACACCACAGCCTCTGCACTTGTTCACTTCGCAAACACAGAAGAAAAAGAAGAAAAAGAAACAGTCACTCTCCACCACCATTCACCAACAACATCACTGCCACAACCACTTCCCACGAGTCCCGTTTCAGATAATGCATTGActgttggattacaagtGTTCATGTTTTTTGTGAGAAGCTTGTGTGATATTTTTTTACTTGCTGGTTGTATTGCAGGTAAAGTGTACAACTATGGATGGATCTTGAATCCATTGTTGCGGTCACGGTTTTCGATTCGAAAGCGGTGCAAGAAATTTTTTGGGGCTATTGCTGATGTAAATGGTAGCCACTGTTCCACTGTGGAGAGACTGTACACATTGGAGAAGAAGTTGTGCCAAGAGGCCAAGCTTGAAGACCTCAACAACACTGTCCCATCAACTAACCCCACATCTGAGATTCATAGGAAATCAACTCTTCAGCGAGAAGTTGGAATACAGCAATGGCACCAATCCTTCGGCAACATCTTCAAGGCCCACAGGGATTATATCCAATCTCTCACAGCTTGGCTTAGGCTCAACCTTCACCACTTTAGCAGAAACCCTCTAAATAAATCTGCTGATGAGTCAAAGATATACACCCTATGTGAACAATGGAACCTTGCTCTTGATCATACTCCGGACAAGGTCGCGTCCAAAGGAATTAAGAGCTTGTTGGAAGATATTCATGCCATTGTGGTTCAACAAACGGAGGAGCATAAACAGAAGAAGAAGTTGGATGCTGCACTGAAAGAGCTTCAGAAGAAGGTTGTTCAGCTTCAATCAATTGAGTGTAAGCATGGCTCGCGTTCCATGTCGGAATCCTCTGATCCCAAGGACCGTGTCACGAAGAAGCGCGCCAAGGTGGAACACCTGAGAGCAAAGGTGGAGAAAGAGAAGACCAAACATGAAAACTCAATCGGAGTAACACACAGAATGACAAAGAAAAATCTGCAGATGGGTTTCCCACAAGCTTTTGAGGGGATTGTGAGGTTTTCAAGTGTGTGTGTGGAGGTTTTTGAATCAGTATACAATAAAGCCAACATTGATGATGTGAAGAGAATATTACCTAAAGAGAATCGACATGTATCATTCATCCAGAATCGGCATTTTTTAATAAAATAA 1281 0.4317 MGCCWHSRIAREETALSHCKARKRCMKHFVEARHSFSSSHSMYIRSLHTTASALVHFANTEEKEEKETVTLHHHSPTTSLPQPLPTSPVSDNALTVGLQVFMFFVRSLCDIFLLAGCIAGKVYNYGWILNPLLRSRFSIRKRCKKFFGAIADVNGSHCSTVERLYTLEKKLCQEAKLEDLNNTVPSTNPTSEIHRKSTLQREVGIQQWHQSFGNIFKAHRDYIQSLTAWLRLNLHHFSRNPLNKSADESKIYTLCEQWNLALDHTPDKVASKGIKSLLEDIHAIVVQQTEEHKQKKKLDAALKELQKKVVQLQSIECKHGSRSMSESSDPKDRVTKKRAKVEHLRAKVEKEKTKHENSIGVTHRMTKKNLQMGFPQAFEGIVRFSSVCVEVFESVYNKANIDDVKRILPKENRHVSFIQNRHFLIK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01171 426 Coils Coil 288 315 - -
Gma16g01171 426 PANTHER UNCHARACTERIZED 1 86 - -
Gma16g01171 426 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 86 - -
Gma16g01171 426 MobiDBLite consensus disorder prediction 319 338 - -
Gma16g01171 426 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 138 176 - -
Gma16g01171 426 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 176 398 - -
Gma16g01171 426 MobiDBLite consensus disorder prediction 66 86 - -
Gma16g01171 426 Pfam Protein of unknown function (DUF630) 1 61 IPR006868 -
Gma16g01171 426 Coils Coil 331 354 - -
Gma16g01171 426 MobiDBLite consensus disorder prediction 322 338 - -
Gma16g01171 426 PANTHER UNCHARACTERIZED 138 176 - -
Gma16g01171 426 PANTHER UNCHARACTERIZED 176 398 - -
Gma16g01171 426 Pfam Protein of unknown function (DUF632) 184 282 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01171 Gma-Chr16 28958890 28961850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01171 - - aip:107639991 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01171 16 28958890 28961850 Gma16g01171 16 28958890 28961850 ECH