Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g01050 ATGGGAAGGGTTCAGGTGAATAACAAGGAAGAATTTTCTCAAATGGAGAACGATGATTTCAGTGATTCACAGTTAGTTCGTCACTTCAGAGGCGTGCTTGTTGCAGTAACAACTGGTGATCGAGAGAATTACGACGAGCTCGTCGGTTATTTGCACCCGAAGAAGAATCTTAATCCTGATGAGGTTGCTATACTTGTGACGACTTTGAAGGCGCTTTCTGGAGCAGTGTCCTATATAGATTCTGTTCATCATGAATCCCTGCTCTTTGCTGTTTCGAGAATGAGCCTCTGGAATTATGGAATTGATATTATGGATGCGCTGCTGGAACTCATAATATCTTTGGCTGCTTCCAATGGAAAATACATCGATTGGTGTTTGGAGATGCTTGTGAAACATTTTGTGCCGCCTTTTTACCTCTTAGATTCTCTGAGACAGGAGAATGGAATTGACAGAAAAAATAAAGTTCTGTCACGGGTACATGCAGCTTTGAAAGAGATAGCTGATTTGGTGCCTCTTGCACCTTTGCGACTATCTCCAATAGTTATCCAGAAAATGCCAAGTGTCTTCAGTAAGGAAACTGAGATTGTCATGTATGTCGAGAATATGTTAAGGCTGGAGAGTGGTGCAATTGGAGAAACTGTCGGTTCTATAATGCTGCCTGCTCTTGTGGATAGGTTGCTAGAGTTGGATGTGGAAATTGGATGGGATGGAATCCTGCAAGAAGATGCCAAAGGCATATTTGAAATGGAGTTAGAAGATGTTACTGAATTTGCAGATGAGGATGAGAATTGTGATAGTATGCCTCCGTCAGAGTTATTAAATAGAAAAAATTTGCAAGGCAACTTGGTTGTTGAGAAATTAGATAGCCTAATGGTGCTGGCATTTTTGCACCTTGAATCCTGTCAAAGCAGTGGCCGTTTGACTGAGGTATTCGATACTCTACTAGCTTCATTTCAGAGAACCGTATTGAATGCGTACAAGTCAAAATTTACCCAGTATGTGATGTTCTATGCATGTGCACTGGACCCTGAAGGATGTGGTGTGAAATTTGCCATGGTTCTTGCTGATATGTTTGGATGTGATGTTAATCCCCCTATTACTAGGATGAGTGCTGCTGCTTATCTTGCTAGTTATTTGACTCGTGCAAAGTTCCTTTCAGCTGCATTGGTCACTAACATCATACAAAGCTTGGTTGATTGGTGTTATGCATATTGCAAGTTACGTGATTTTGATATGAACCCACGAGCACATCAAGTTTTTTATTCTGGGTGCCAGCAGGCCATTATGTATATTCTGTGTTTTCGCATGAGATCTTTGATGGATATTCCTAGGCTTAAATTGCAGCTGCTTAATATGCCCATGGAGGCAATCTTGAAACATAAATTGAGTCCCTTGAAGGTGTGTTTGCCTACTGTAGTAGTGGAATTTCTTAGACAGGCAAAGGCTGCTCAACTTTTCATGGCGTCAGAGTCATTTGTTTTTGATGATATGCTTGAGTCTGATCTTTCCAAGGCTTTTGGCGGGATTGATAGACTTGACATGTTTTTCCCATTTGATCCATGTTTGTTGAAGAAAAGTGAAAGGCAAGTCTACATAAGGCCACATTTTGTTCGCTGGTCAAAAGTCAGAACTACATATGATGATGATGACAATGACGAACTCAGTGATAGTGGCAGTGAAGTATCAGATGATGATTTTATCGACAGGAACACAAAGGATATGATTGATGATGATATGATGGTGAGCGTTGAAGGAGCAGCAAACTCTAAGATTCGTTCCCTGCTATATTGTCTGAATCCAACATGGTTTGTGTACGGTATTTGA 1824 0.4084 MGRVQVNNKEEFSQMENDDFSDSQLVRHFRGVLVAVTTGDRENYDELVGYLHPKKNLNPDEVAILVTTLKALSGAVSYIDSVHHESLLFAVSRMSLWNYGIDIMDALLELIISLAASNGKYIDWCLEMLVKHFVPPFYLLDSLRQENGIDRKNKVLSRVHAALKEIADLVPLAPLRLSPIVIQKMPSVFSKETEIVMYVENMLRLESGAIGETVGSIMLPALVDRLLELDVEIGWDGILQEDAKGIFEMELEDVTEFADEDENCDSMPPSELLNRKNLQGNLVVEKLDSLMVLAFLHLESCQSSGRLTEVFDTLLASFQRTVLNAYKSKFTQYVMFYACALDPEGCGVKFAMVLADMFGCDVNPPITRMSAAAYLASYLTRAKFLSAALVTNIIQSLVDWCYAYCKLRDFDMNPRAHQVFYSGCQQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAILKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDMFFPFDPCLLKKSERQVYIRPHFVRWSKVRTTYDDDDNDELSDSGSEVSDDDFIDRNTKDMIDDDMMVSVEGAANSKIRSLLYCLNPTWFVYGI 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g01050 607 Pfam RNA polymerase I specific transcription initiation factor RRN3 19 543 IPR007991 GO:0001181|GO:0006361
Gma16g01050 607 PANTHER TRANSCRIPTION INITIATION FACTOR IA RRN3 5 578 IPR007991 GO:0001181|GO:0006361
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g01050 Gma-Chr16 26509827 26517190 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g01050 K15216 - gmx:100814416 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01050 16 26509827 26517190 Gma16g01050 16 26509827 26517190 ECH