Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00990 ATGGCCACCACAATGCCGAAATTCAAGCGAAAACTTGTGATGGGTGCAAATGGTCGCACCAACCCCTTGGTGTGGCTAGTGGCGATTATCTGCACCATCATAGCAGTAGCAGTGGTAGTTGTAGGCATTGTAGTGTTCATTGGTTACATAGTGATACACCCTAGAGTGCCTGTGATCAGTGTCACCAATGCACATTTAGATCTTCTCAGAAATGACTATGCTGGTTTGCTCCAAACCCAACTCACCATCGTCGTGACTGCGAAGAATGGGAATGCCAAGGCTCATGCATCCTTCTCCGCGATCACCTTCAACATCAGCTACCAGGGCCAAGACATTGCTGTGCTTGTTGCTGACCCTTTTGAGGTGCCAAAGAACAGCTCAAAGGACCTCAGCTATGTTGTCCAATCTTCTTCTATACCCTTGACTCCTGATCAAATGGAGGAAGTGAATGATGCTTGGAAGAGGAATGAAATTGAGTTTGACTTCAAAGGGGCTGCAAGGACACAGTGGAGGGTAGGGCCTTTAGGGTCTGTGAAGTTCTTGTGCCATCTTGATTGTGACCTCAAGTTTCGCCCCGTGAATGGGACTTACATTCCCTCGCGGTGCACCTCCAAATCACACTGA 624 0.4824 MATTMPKFKRKLVMGANGRTNPLVWLVAIICTIIAVAVVVVGIVVFIGYIVIHPRVPVISVTNAHLDLLRNDYAGLLQTQLTIVVTAKNGNAKAHASFSAITFNISYQGQDIAVLVADPFEVPKNSSKDLSYVVQSSSIPLTPDQMEEVNDAWKRNEIEFDFKGAARTQWRVGPLGSVKFLCHLDCDLKFRPVNGTYIPSRCTSKSH 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00990 207 Pfam Late embryogenesis abundant protein 85 168 IPR004864 -
Gma16g00990 207 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 14 207 - -
Gma16g00990 207 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 14 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00990 Gma-Chr16 23408028 23408651 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00990 - - gmx:100797168 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01567 01 51199045 51205190 Gma16g00990 16 23408028 23408651 PCT
Gma09g02024 09 45821478 45822131 Gma16g00990 16 23408028 23408651 PCT
Gma16g00990 16 23408028 23408651 Gma01g01567 01 51199045 51205190 PCT
Gma16g00990 16 23408028 23408651 Gma09g02024 09 45821478 45822131 PCT