Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00717 ATGGAACAAATTCCATTGTTTAATGAGAAAATGAAATTGGCTCAGAAAGCAGCCATGGCTAAACGATGGGAAGACTTCAAGAAAATAATGAAGGACGACCAGGAGAACTTGCTCAAGCAGTTTGATCTGTTTGAGAACAGTGCCATCCATGTTGCAACTCGCTCTAACAGCCCACGACTCCTCAGAGAATTGATAGAGATGTTACCAAAAGAAGAAAGGTGGCAAGCTTTGTGCAAGGAAAATCGCGAAGGGAACACGGTTTTACACGAGGTTGTGTTTTGTAAGAAGAAGAAAATGGCTGATGTTGTGTTTGAGATTGAAGATGAGTTGTTATTGCAACAACAATCATCATCACTAGAGGAAAAGAGAACATTGCTAGATATGAGAAACCACCGAGGTGAAACCCCTTTGTTCATGGCTGCAATGCATGGAAAGCTGAAGATGCTCAAGCATATGGCCAACCGTACAGGCACACGAAATATGGAAGATTTTCGAAAACATTTGCATCGATCTGACAAATATTCTGCTCTTCATGCCAGTGTCATGGGGCAACATTTTGATGTTGCAATTTGGCTAGTAAGAATGAATAGAGAACTTGCTATGGAAAAGGATGAGAAGGAATTAACTTGTCTTCAACTACTTGCCAAAATGCCACAGGTTTTCCGAAGCCACACTCACATGGGACTTGTGAAGAGCATCATATATCACTTATTCCCTGATAATGGATATGAAATTGAAGATGATGAAAACTTCCAATTATTCAAACACAAAAGCGACGTAGAAAATGGTAAATTGGATGAAAGGAAACTCGCCAAATCAGTTATTTCAAGGACCAATTACAAATTTTGGAAACGCTTTGCAAAAGAGTTTGAAGGGATTGATCATATGTGGAAGGAAAAGAAAATACATAAGTTAGCTGAATGTCTAACAAATATTTTAGTGCACTATGACTTCTCGTGGCAGATATCCCACAATGAGTATAAAAGGACAACAATGATTTCAATGCCACGTGATCCTATTAGTGTGGCCAAAAGGAGAAGGATAAGTGCACAAAAAAGGGAAGAAAGGCGTAAGAACGATGAAGAACCTCCCGAACGCACAGCATTACTCATAGCAACTAAAACTGGAATTGTAGAAATTGTTGAAAAATTCCTTGATGTGAATCCCGAGGCTATTTTCCATGTCACTGAGAATAACCAGAATATATTGACCATGGCTGTTAAGTATCGCCAAAAGAAAATTGTTCGAATCATACAGAGAAAAGGTGCAATTGAATCATTGGTTGGTCAAATCTCAGACAAAGGTCGTACTATTTTGCATGAAGTTGCAAGGATGGATTACTACAAAGGGGAACACTTAGCTGGAGTGGCATTCCAACTACAAGATGAGCTGCGTTGGTATGATAAAGTAAGAAGATTGATTCCTAAACACTACAACATGCACTGTGACATAGATGGGCATACACCCGAAGATATGTTAGAAATGGAGCATGATGGAATGCTTAAAGAGGCACAAAAATGGTTAAAGGAAACAGCTCAATCATGCTCTACTGTTGCTATTCTAGTTGCTACGGTTGTATTTGCTGCAGCCTACACCATTCCAGGTGGAACTGAAAATGGCACTCCCGTATTCCTTCATTCTCATGTGTTTCTCTTTTTCACTATTATGGATGTCGTGGCACTTGCTACCTCACTAGCTTCAGTGGTGGTGTTCCTTTCCATCCTCACTTCCCCATGTGAGTTGTGGGATTTTCACAAGTCTCTCCCACGAAAACTAAATTTGGGATTCGCTTTGTTGTTCTTGTCATTGATGACAACAATGTTAGCATTCAGTGCAACCATGTTGCTGACCATTCGCTTGGAATGGAAGAATTGGACCTCAACATTGATATATAGTGCTGCTTTCTTTCCCGTCACTATATTTGCAATGATTCAATTCCCTGTTTATGTGATGACACGAAGCATCGTCAAGCATCTTTGGAAGCAAATTAAGAAGGTCCTTCCAATGAGATTGGTTAAATGTTTCACGAATCTCAATTGA 2040 0.3971 MEQIPLFNEKMKLAQKAAMAKRWEDFKKIMKDDQENLLKQFDLFENSAIHVATRSNSPRLLRELIEMLPKEERWQALCKENREGNTVLHEVVFCKKKKMADVVFEIEDELLLQQQSSSLEEKRTLLDMRNHRGETPLFMAAMHGKLKMLKHMANRTGTRNMEDFRKHLHRSDKYSALHASVMGQHFDVAIWLVRMNRELAMEKDEKELTCLQLLAKMPQVFRSHTHMGLVKSIIYHLFPDNGYEIEDDENFQLFKHKSDVENGKLDERKLAKSVISRTNYKFWKRFAKEFEGIDHMWKEKKIHKLAECLTNILVHYDFSWQISHNEYKRTTMISMPRDPISVAKRRRISAQKREERRKNDEEPPERTALLIATKTGIVEIVEKFLDVNPEAIFHVTENNQNILTMAVKYRQKKIVRIIQRKGAIESLVGQISDKGRTILHEVARMDYYKGEHLAGVAFQLQDELRWYDKVRRLIPKHYNMHCDIDGHTPEDMLEMEHDGMLKEAQKWLKETAQSCSTVAILVATVVFAAAYTIPGGTENGTPVFLHSHVFLFFTIMDVVALATSLASVVVFLSILTSPCELWDFHKSLPRKLNLGFALLFLSLMTTMLAFSATMLLTIRLEWKNWTSTLIYSAAFFPVTIFAMIQFPVYVMTRSIVKHLWKQIKKVLPMRLVKCFTNLN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00717 679 Gene3D - 2 236 IPR036770 -
Gma16g00717 679 PANTHER CASKIN 28 662 - -
Gma16g00717 679 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 28 662 - -
Gma16g00717 679 Pfam Domain of unknown function 505 615 IPR026961 -
Gma16g00717 679 Gene3D - 339 505 IPR036770 -
Gma16g00717 679 SMART ANK_2a 83 112 IPR002110 GO:0005515
Gma16g00717 679 SMART ANK_2a 398 428 IPR002110 GO:0005515
Gma16g00717 679 SMART ANK_2a 132 161 IPR002110 GO:0005515
Gma16g00717 679 SMART ANK_2a 172 201 IPR002110 GO:0005515
Gma16g00717 679 SMART ANK_2a 364 394 IPR002110 GO:0005515
Gma16g00717 679 SMART ANK_2a 44 73 IPR002110 GO:0005515
Gma16g00717 679 SUPERFAMILY Ankyrin repeat 35 218 IPR036770 -
Gma16g00717 679 MobiDBLite consensus disorder prediction 344 366 - -
Gma16g00717 679 SUPERFAMILY Ankyrin repeat 365 489 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00717 Gma-Chr16 8874609 8909076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00717 366 618 Miscellaneous Gene Families AT3G09550 26.230 2.05e-13 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00717 - - gmx:100788731 1325.07