LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma16g00532	ATGAAAGGAAAGAACAGGAGAAGTGGTGGTGCTATCCATATGGAGTACCTCATTCACATTCAGGAGATTAAGCCTTGGCCCCCATCACAGTCTCTCAGATCACTTCGTTCTGTGTTGATACAATGGGAGAATGGTGAACGCTCTTCGGGGTCTACCGGTGTAGTTTCACCTTCGCTTGGTCCTAATTCTGCTGCCGGTGAGGGAAAACTCGAGTTTAACGAGTCGTTTAGGCTTCCTGTAACTCTGTCAAGGGATATGTCTATTCGAAATAGTACTGCTGCTGTGTTCCAGAAGAATTGCTTGGAGTTTCACTTGCATGAAACTCGAAGAGATAAGACCACTAAAGGGCAGTTACTGGGGACTGCCATCATAGACTTGGCAGATTGTGGCGTGCTTAGAGAGACCTTGAGCATTCGTACGCCATTGAACTGCCAGAGGAACTACAGAAACACAGATCAGCCACTTTTGTTCATTCAAATTGAGCCTGTTGAAAAGAGCTGCCCTAAGTCCTCCTTGAAGGACAGCTTGTCAAAGGAGGTGACAAAGGGAAATAATGGCAGTGAATCTATATCAGAATTGATGAATGGAGAGTATGCTGAGGAAGCTGAGATTGCCTCATCTACTGATGATGATGTTTCATCTCATTCATCTGCGGCCGCAGTCACTACTTCCTCTGAGTCTAGCGCGTGTATGCCCCCCGAACATGAAGAGAATGCACCAAATGGACCAGCTCAAAACAGTGGTAGGAATGACAAGGAGCATGAGCATCCCTTGGCCTCAGAGACAAGAGTTGAGAAGTTGAATGAGATGGAACAAGATGCATATGAGAGACTGGAGAGGAGTTCATCCTATGTGTCCTCCAAAATTGGGAGTCCAGTAAATGGTCATACCTCTATTACAAGTACTCCAAATCATAGATCAGCAACAACCCCAAAGCAGGCTGCTTCTTTGAATGCTGATTCTTCGTCCCCAATCTTGGAGGAAAATTCTAAGAGCAGGTCCATAAGCAGTGATGATGAAAATTTGGATCAGGAGGGTTGTGAAAAAGTTTCCAATGGTAGAAATATGAGTACAGGTGTTCAAATAAACAATGACGAAAGTGATTTTGACATCTATTCTAGCAACACTACATCTCTAGACAGTAATTACCTCGTGGACAAGAATCCAAGCTTTGGTTTGGGAACCAAAGACAACTTAAGTGAAATGTTTCATTCTGATAAGCAATATCATGTAGAAGATGAATCGGTGGCACAAGGTGTGAAAGATCAAGTTAATTTGAGTAGCAATTCATATTCTTTAGGTGGGTTAGATAATGGTATGAAAGGCAATGTTCTGAAAAATGAAAGATTAAAGCATGTGAGGTCTGTAAGATCATCAGCCGACTCAGTTAGGTCTATTGGGTCACTTGGTAACAATCATCTCGCTGAGGTAAAGGAAAATGGTGTTAATGGAGATACCCAAAATAATGGAGGGAACATTAGAAGCAGTGACAGAAAAGATGCCAAGGTTTATCCAAGGGAAGCCAGAAATGCCATTTTAGATCGCAAGATTGAGCACTTGGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGGTATTGAGGCTGCTTTATATTCAGTAGTTGCTGAGCATGGAAGCTCCACGAGTAAGGTTCATGCCCCAGCTCGACGCCTTTCGAGGCTGTACCTTCATGCTTGTAAAGAAAATCTTCAAGCAAGAAGGGCTGGGGCAGCTAAAAGTGCTGTTTCAGGATTAGCCCTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGGTTAACATTTTGGTTGTCTAATTCTATTGTGCTGAGAACAATTATAAGCAAAACTACCAAAGGCATGACACCATCTAATCCTTCTGGATCTAGTACAAGTAGGAGGAATGGAGAAGGGAATGACAAGGTAACACAACCATTACTATGGAGGGGGTTCTCTCATAGAAAAACTGAAAATACAGCTTTTGAATATGGAGGTATAGGTAACTGGGATGACCCAAATGTGTTCACATCAGCATTGGAAAAGGTTGAAGCTTGGATCTTCTCTCGCATTGTGGAATCTATTTGGTGGCAGTCTTTGACTCCACATATGCAGCTTGCTGATGCAAAGATCACTCATAAGGATTCAGCAAAAAACTATACAAATATGTCTAGTTCATGCGATCAAGAGTGGGGAAATTTATCACTAGATATTTGGAAGAATGCTTTTAGAGAAGCCTGTGAAAGGCTTTGCCCTATCCGAGCTGGAGGGCACGAGTGTGGCTGTTTGTCTGTGCTACCTAAATTGATAATGGAGCAGTGTGTGGCTAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGGGAATCTGATGATGATATTCCTACTGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGTCAATCAAGCTTTGGGGCTGGTGCACAGCTAAAAACTGCGATTGGTAACTGGTCTAGATGGCTGACTGGTCTATTTGGTATGGATGATGACGACCCACTTGAGGATATAGATGATAATGACCTTGATAGCAATGATGAAAGTCAAAATACCTTCAAGTCCTTCCATCTTCTTAATGCTTTAAGCGACCTCCTGATGCTTCCTAAGGATATGCTCTTAAATGCATCCATCAGGAAAGAGGTGTGTCCAATGTTTAGTGCATCGCTAATCAAGAAGATTCTAGACAATTTTGTCCCGGATGAGTTTTGCCCTGATCCAATTCCCACTGATGTTTTTGAAGCTCTGGACTCACAGGATGATCTTGAGGATGAAAATGAGTCTATCAGCAACTTCCCCTGCAATGCAGCTCCCACTGCATATTCCCCTCCACCAGCAGCTACCATTACAAACATTACTGGGGAGTTTGGAAGTGAATCTCAGCTAAGAAGAAGCAAATCTTCTGTTGTTAGGAAGTCATACACCAGTGATGATGAGCTCGATGAACTAAACTATCCATTATCTTCCATATTGAATATTGGCTCATCCTCATCAGCATCAACAAACTCCAACCGGAAGGGGAAAGACAGTCGCGATGAATCTGCCATCAGATATGAACTCCTCAGGGATGTTTGGATGAACAGTGAATGA	3132	0.4285	MKGKNRRSGGAIHMEYLIHIQEIKPWPPSQSLRSLRSVLIQWENGERSSGSTGVVSPSLGPNSAAGEGKLEFNESFRLPVTLSRDMSIRNSTAAVFQKNCLEFHLHETRRDKTTKGQLLGTAIIDLADCGVLRETLSIRTPLNCQRNYRNTDQPLLFIQIEPVEKSCPKSSLKDSLSKEVTKGNNGSESISELMNGEYAEEAEIASSTDDDVSSHSSAAAVTTSSESSACMPPEHEENAPNGPAQNSGRNDKEHEHPLASETRVEKLNEMEQDAYERLERSSSYVSSKIGSPVNGHTSITSTPNHRSATTPKQAASLNADSSSPILEENSKSRSISSDDENLDQEGCEKVSNGRNMSTGVQINNDESDFDIYSSNTTSLDSNYLVDKNPSFGLGTKDNLSEMFHSDKQYHVEDESVAQGVKDQVNLSSNSYSLGGLDNGMKGNVLKNERLKHVRSVRSSADSVRSIGSLGNNHLAEVKENGVNGDTQNNGGNIRSSDRKDAKVYPREARNAILDRKIEHLENKIKMLEGELREAAGIEAALYSVVAEHGSSTSKVHAPARRLSRLYLHACKENLQARRAGAAKSAVSGLALVAKACGNDVPRLTFWLSNSIVLRTIISKTTKGMTPSNPSGSSTSRRNGEGNDKVTQPLLWRGFSHRKTENTAFEYGGIGNWDDPNVFTSALEKVEAWIFSRIVESIWWQSLTPHMQLADAKITHKDSAKNYTNMSSSCDQEWGNLSLDIWKNAFREACERLCPIRAGGHECGCLSVLPKLIMEQCVARLDVAMFNAILRESDDDIPTDPVSDPISDPKVLPIPPGQSSFGAGAQLKTAIGNWSRWLTGLFGMDDDDPLEDIDDNDLDSNDESQNTFKSFHLLNALSDLLMLPKDMLLNASIRKEVCPMFSASLIKKILDNFVPDEFCPDPIPTDVFEALDSQDDLEDENESISNFPCNAAPTAYSPPPAATITNITGEFGSESQLRRSKSSVVRKSYTSDDELDELNYPLSSILNIGSSSSASTNSNRKGKDSRDESAIRYELLRDVWMNSE	1043

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	177	191	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	622	645	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	622	642	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	348	366	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	248	278	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	479	501	-	-
	Gma16g00532	1043	ProSiteProfiles	C2 NT-type domain profile.	4	164	IPR019448	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	332	347	-	-
	Gma16g00532	1043	Pfam	N-terminal C2 in EEIG1 and EHBP1 proteins	14	129	IPR019448	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	209	231	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	47	66	-	-
	Gma16g00532	1043	Coils	Coil	510	537	-	-
	Gma16g00532	1043	PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP205	2	1043	IPR021827	GO:0005643
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	279	331	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	1007	1027	-	-
	Gma16g00532	1043	PANTHER	EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN	2	1043	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	203	366	-	-
	Gma16g00532	1043	MobiDBLite	consensus disorder prediction	168	191	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma16g00532	Gma-Chr16	5881343	5887312	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma16g00532	-		-	gmx:100775183	1987.62

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma16g00532	16	5881343	5887312	Gma19g00838	19	33598663	33604403	PCT
	Gma19g00838	19	33598663	33604403	Gma16g00532	16	5881343	5887312	PCT