Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00528 ATGGGAATGACACCGAAAATAGCTCCTTCGATGCTCTCTTCCGACTTCGCCAATTTGGCTTCCGAGGCTCAGCGCATGCTCCACTTCGGCGCCGATTGGCTCCACATGGACATCATGATCTGTTTCCTTTCCTTTCTCCCCTTTCCCTCTATTTCGTGCAGGCATTTTGTCCCCAATTTAACTATTGGCGCTCCAGTTATTGAAAGTTTGAGAAAGCACACAAAGGCATATTTGGATTGTCACCTTATGGTTACAAATCCTCTTGATTATGTTGAACCCTTGGCAAAAGCTGGTGCTTCTGGTTTTACATTTCACGTAGAGACATCAAAAGATAACTGGAAAGAACTTATCCAAAGAATCAAGTCACATGGCATGATTCCTGGTGTAGCATTAAAGCCTGGGACCCCCGTTGGAGAGGTTTATCCTCTGGTGGAAGCCGAAAATCCTGTGGAAATGGTTCTTGTGATGACTGTAGAACCTGGATTCGGAGGACAAAAATTTATGGCAGAGACGATGGATAAAGTACGTATACTTAGGAAGAAGTATCCATCACTTGACATAGAGGTTGATGGTGGTTTAGGGCCTTCAACCATAGACGTGGCCGCATCAGCAGGGGCAAATTGCATTGTTGCTGGAAGTTCTGTTTTTGGTGCACCTGAGCCAGCTCAAGTAATATCCTTACTGAGGAGTTCTGTTGAGAAAGCCCAGCAAACCTCGATACAGTAA 726 0.4518 MGMTPKIAPSMLSSDFANLASEAQRMLHFGADWLHMDIMICFLSFLPFPSISCRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVETSKDNWKELIQRIKSHGMIPGVALKPGTPVGEVYPLVEAENPVEMVLVMTVEPGFGGQKFMAETMDKVRILRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSVFGAPEPAQVISLLRSSVEKAQQTSIQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00528 241 Pfam Ribulose-phosphate 3 epimerase family 6 216 IPR000056 GO:0005975|GO:0016857
Gma16g00528 241 PANTHER RIBULOSE-PHOSPHATE 3-EPIMERASE 1 238 - -
Gma16g00528 241 Gene3D Aldolase class I 1 239 IPR013785 -
Gma16g00528 241 PIRSF RPE 1 241 IPR026019 GO:0004750|GO:0006098
Gma16g00528 241 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 153 175 IPR000056 GO:0005975|GO:0016857
Gma16g00528 241 CDD RPE 6 229 IPR000056 GO:0005975|GO:0016857
Gma16g00528 241 SUPERFAMILY Ribulose-phoshate binding barrel 3 234 IPR011060 -
Gma16g00528 241 Hamap Ribulose-phosphate 3-epimerase [rpe]. 4 231 IPR026019 GO:0004750|GO:0006098
Gma16g00528 241 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 1 238 IPR000056 GO:0005975|GO:0016857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00528 Gma-Chr16 5845522 5850892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00528 K01783 - gmx:100527490 441.425