Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00479 ATGCCGGAGGAAGAAGTAGTGGAGCTCAAGTTCCGTCTCTACGATGGATCCGACATCGGTCCCTTCCGTTACTCCCCTGCCTCCACCATCGCCATGCTCAAGGACCGCATTTTTGCAGACTGGCCCAAAGACAAGAAGATTATACCAAAAGCAGCAAATGATATAAAACTGATAAGTGCTGGCAAAATTTTGGAGAACCACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGCGAGCTTCCCAAAGGGGTTATAACCATGCATGTTGTGGTCCAGCCATCTTTGCTCAAAGCAAAAACAGAGAAAAAAGTTGATGAGGTGCCCAGAAAACATATATGTGCATGTTCGATATTGTGA 357 0.4594 MPEEEVVELKFRLYDGSDIGPFRYSPASTIAMLKDRIFADWPKDKKIIPKAANDIKLISAGKILENHKTVGQCRVPFGELPKGVITMHVVVQPSLLKAKTEKKVDEVPRKHICACSIL 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00479 118 Gene3D - 1 100 - -
Gma16g00479 118 Pfam Ubiquitin-2 like Rad60 SUMO-like 6 116 IPR039540 -
Gma16g00479 118 CDD Ubl_MUBs_plant 7 93 - -
Gma16g00479 118 SUPERFAMILY Ubiquitin-like 2 95 IPR029071 -
Gma16g00479 118 ProSiteProfiles Ubiquitin domain profile. 7 75 IPR000626 GO:0005515
Gma16g00479 118 PANTHER MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 1 118 - -
Gma16g00479 118 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 1 118 IPR040015 -
Gma16g00479 118 PIRSF MUB 1 118 IPR017000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00479 Gma-Chr16 5189088 5193521 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00479 - - gmx:100500075 241.121