Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00478 ATGCATTATCAAGCAGCAGCGGCGTCGTGGGGGAGCTACGTGGCGGGGGCCCCACGGAACAGCGCGGCGGCGGCGGTGGTGGTGGGGGACCCACTGGAGCGGATAGAGAGGCTGGCGTCGGAGAGCGCGGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCACGCCATCAAGAGGCTCTTCTGCGGCATGGGCGTGAACCCGACCGTGCACGAGCTGGACGAGGATCCAAGAGGCAAGGACCTCGAACGCGCCCTCATGCGGCTCCTCGGAACCCCCTCGGTTGTCCCTGTCGTCTTCATCGGTGGCAAGCTTGTCGGAACCATGGACCGAGTCATGGCTTGCCACATTAACGGCACCCTCGTTCCTCTCCTCAAAGAAGCTGGTGCTCTCTGGCTTTGA 405 0.6346 MHYQAAAASWGSYVAGAPRNSAAAAVVVGDPLERIERLASESAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDLERALMRLLGTPSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00478 134 PANTHER GLUTAREDOXIN-C5 5 133 - -
Gma16g00478 134 Gene3D Glutaredoxin 30 133 - -
Gma16g00478 134 CDD GRX_GRXh_1_2_like 43 125 - -
Gma16g00478 134 Pfam Glutaredoxin 44 107 IPR002109 -
Gma16g00478 134 TIGRFAM GlrX-like_plant: glutaredoxin-like family 35 134 IPR011905 -
Gma16g00478 134 ProSiteProfiles Glutaredoxin domain profile. 32 133 - -
Gma16g00478 134 PANTHER GLUTAREDOXIN 5 133 IPR011905 -
Gma16g00478 134 SUPERFAMILY Thioredoxin-like 32 133 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00478 Gma-Chr16 5181719 5182356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00478 1 134 Miscellaneous Gene Families AT3G02000 63.309 1.46e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00478 K03676 - gmx:100808865 272.322