Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00477 ATGGGAAGCACATTTAATCCACAGATTTTGGTGGAAAAACTAGCCAAGCTGAATGTTTCACAAACGAGCATAGAGACCCTGTCACATTGGTGCATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACATGGGATAGACAATTTCACAGTTCTTCACGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATTTTACAGAACAGCAGGCGAAAGGGTTCTGAATTTGTAGGTGAATTCTGGAAGGTTCTTCCAGATGCTCTTCGAGATGTGATTCAAAATGGAGATGATTTTGCAAGGAATGCAGCACTTCGGCTGATTGGTATATGGGAAGAGAGGAAAGTTTTTGGTTCTCGTGGTCAAATTCTTAAGGAAGAATTTGTTGGGAGTCATGTGGAAAATAATAGCCGAGATGTGAAACCTACAAACATGAAACTGAGGCCATCTGTGGGGAATGCATTGGAGAAAATAGCTTCAGGTTTTCATGTGGTTTATGGAGGGCAAACAGATGAAGATGCCGTATTGAGCAAATGCAGGAATGCCATTAACTGTCTTGATAAAGCAGAAAAGGAAATAGTTTCAGGGCAATTCAGTGGATCTGCACTAGTGGATGAGCTCCAGGGGCATAATGCTGTACTGAAGGACTGCATTGAGCAATTAACTGCCATAGAGTCATCAAGAACTAGTCTTGTGTCTCTCTTGAGAGAAGCTCTTGAGGATCAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGCTGCACATGTTCAGTCAGAACGGGCAACTAACACCTGCCAACAGTTATTGAATGGCAACAACATTCAGTCATTAGCTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGACTCCCGCAAGTTTAAGTATTTCTAGTGAAAGGGAGCAATCAGCTCCATTAATGTACACACCACAAGTGTCATTTTCTCAAAAAACTGGACACATTGAGGAAGATCCACGCAAGTCTGCAGCTGCTGCAGTGGCAGCAAAACTGACTGCTTCAACATCCTCCGCGCAGATGCTATCTTTTGTGCTGTCCTCTCTAGCATCCGAAGGTGTGATAGGCAATCCAATGAAAGAATCTTCTGCAGATTATCACTCTGAGAAGAGGACCAAGCTCGAGAATGACCAGCAGCCATCTTTTATACCATCTCAGAATCCTCAGCAACCACTTCCTCCCTTTCCACTTTCTGAGTCTATTCAACACAATGCACCCACAACCAACCAGCAATCTACTCCCAGCGAACCACCACCTCCACCCTCTTCATCACCTCCCCCTTTGCCGCCACCACCACCACCAATGTCACAGTACCCTGTGCCGCAGTTCATGCAGACTGCCGGATCCATTAGTAGTATGGCATATGGCTATGGTGTGGCACAACAGCCATCAATGGCAGCCTATCCGGGTGTTGGGCCTTCCCTGAATGGTGTTTCTTCTTTTACCCCTCCTCCAATGGGTACATATCAGGGTTTTCAGGGCACAGATGGAAATTACTATAATCAGCCCTCATCAATGCCTATGGCCCCAATATCTCGACAATAA 1569 0.4481 MGSTFNPQILVEKLAKLNVSQTSIETLSHWCIFHMNKAKQVVETWDRQFHSSSREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDFARNAALRLIGIWEERKVFGSRGQILKEEFVGSHVENNSRDVKPTNMKLRPSVGNALEKIASGFHVVYGGQTDEDAVLSKCRNAINCLDKAEKEIVSGQFSGSALVDELQGHNAVLKDCIEQLTAIESSRTSLVSLLREALEDQEFKLGQVRSQIQAAHVQSERATNTCQQLLNGNNIQSLAEQSSKEIQTSMTPASLSISSEREQSAPLMYTPQVSFSQKTGHIEEDPRKSAAAAVAAKLTASTSSAQMLSFVLSSLASEGVIGNPMKESSADYHSEKRTKLENDQQPSFIPSQNPQQPLPPFPLSESIQHNAPTTNQQSTPSEPPPPPSSSPPPLPPPPPPMSQYPVPQFMQTAGSISSMAYGYGVAQQPSMAAYPGVGPSLNGVSSFTPPPMGTYQGFQGTDGNYYNQPSSMPMAPISRQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00477 522 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Gma16g00477 522 MobiDBLite consensus disorder prediction 404 419 - -
Gma16g00477 522 MobiDBLite consensus disorder prediction 494 522 - -
Gma16g00477 522 Gene3D - 2 129 IPR008942 -
Gma16g00477 522 MobiDBLite consensus disorder prediction 363 451 - -
Gma16g00477 522 SMART 558neu5 9 130 IPR006569 -
Gma16g00477 522 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 522 - -
Gma16g00477 522 MobiDBLite consensus disorder prediction 420 447 - -
Gma16g00477 522 PANTHER OS01G0925000 PROTEIN 1 522 - -
Gma16g00477 522 Pfam CID domain 9 120 IPR006569 -
Gma16g00477 522 SUPERFAMILY ENTH/VHS domain 13 117 IPR008942 -
Gma16g00477 522 CDD CID_RPRD_like 7 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00477 Gma-Chr16 5150111 5162203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00477 K15559 - gmx:100808335 952.97