LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma16g00467	ATGAAGTCCCTCAGCAAGTTGAAGAAAACACTTCACAAGACAGTCTCCAAGGACAAAAAGGACTTTCCCCCCACCGTTAAGTTCGACGAACTCGCCCTCGCTGCCAAGgacatgcaagccatgagagattgctacgatagcctgctttctgcagccgctgccacgcaaaacagtgcttacgAATTTGCCGAGTCACTGCAGGAAATGGGTACTTGTCTACTGGAGAAAACTGCCTTAAATGATGATGAAGAAAATGGTAAAGTTTTGGGGATGCTTGGAAGTGTGCAGCTTGAACTTCAGAAGCTTGTTGATAGCTATCGTTCTCACATAGTACTGACAATAACCAATCCATCAGAGTCTCTTCTTAATGAGCTAAGAACTGTTGAGGACATGAAGCGGCAATGTGATGAAAAAAGAGATGTTTATGAATACATGATTGCCCAACAGAAAGAGAAAGGAAAGTCAAAAAGTGCTAAAGGTGAAAGTTTCACGCTACAGCAGTTGCAAGCAGCTCATGCTGAATATGAAGACGAAGCAAAACTTTGTGCCTTTCGGTTAAAATCGCTGAAGCAAGGCCAGTCACGCAGTCTCCTAACACAAGCAGCGCGTCACCATGCTGCTCAGTTGAATTTCTTCCGGAAAGGACTTAAATCACTAGAGGCTGTTGACCCACATGTTAGGATGATTGCTGAACGACAACATATTGATTACCAATTCAGTGGCCTGGAGGATGATGGAGGTGAAAATGATAATAATGATGATGGGAATGATTTTGACGTCATTGAAGGTGGTGAGTTGAGTTTTGACTACAGGGCAAATAAGCAAGGGCCATATATTGTTTCCACATCACCGAACTCAGCAGAGGTGGAAGAATCAGGCCGTTCATATATTCGAGCTTCAACCCCAGAAACTGCAGAGACAAGTTTAGAGAAGAACCAAGGAGATTTTAAAGTTTCAAATAGAGTCGGCGGCAGTTATTCAGCTCCAATACTTGCAGAAAAGAAATTTGACCCAGCTGAAAAAGTAAGACAACTTTTAGCATTTTCTGCAGCAAAGTCTAATGCATATGTTCTCCCTACACCAGTCAACATCAAAGAAACCAAAACTAGCTCAGCCCCCCGCACTAGTGCCAGTGGATCTTTGCATAATTTGTGGCATTCTTCCCCTTTGGATGAAAAAAAGAATGAGAAAGATGTTGATAGTAAATTGTCAGAACCGACTATCCCTAGAGCTCACTCTGTTCTCAAAGAAAGTGACAGTGATACTTCATACACTCAGTTACCACGCCCTTCAGCAGATGGACTCTTACTTCCACAAGTTGATTTTTTGAGTGCCTCTGATACTAAGAAAATAAAAAGACAAGCTTTTTCAGGTCCATTGACTAATAAACCATTATCAGTAAAACCTGTTTCTGGGGGGTTTTCACGTTTACCAGTGCCCCAGCCTTCATCTCCGAAAGCATCTCCTAATGCTTCACCTCCCCTTGTTTCTTCACCCCGGATAAGTGAGCTTCATGAACTTCCTAGACCTCCTGGTAATCAATCTAGCAAGCCACGAGTGGGTCACTCTGCTCCATTAGTATTAAAAAATCCAGAGGCTGCCATGACTAATAAATTTCCTTCAGTTGTATTGAGGGCAGCATCTCCACTTCCAACTCCACCTGTCTCTCGGAGTTTCTCTATACCTTCTAGTGGTCAGAGAGTTGTGGCATTAAATGTTTCTAATACCAAGTATTTGGATACTCCCCAAGTTTCAAAGGTCGATAAAGCTGTGTCACCTCCACTAACACCCATGTCCCAGAGAGCATCTAATATATCTGACCTGGCTTCTCACTCTAGTGAAATCCAAGTGAATGCAGGTGGGAGCTAA	1869	0.4109	MKSLSKLKKTLHKTVSKDKKDFPPTVKFDELALAAKDMQAMRDCYDSLLSAAAATQNSAYEFAESLQEMGTCLLEKTALNDDEENGKVLGMLGSVQLELQKLVDSYRSHIVLTITNPSESLLNELRTVEDMKRQCDEKRDVYEYMIAQQKEKGKSKSAKGESFTLQQLQAAHAEYEDEAKLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVDPHVRMIAERQHIDYQFSGLEDDGGENDNNDDGNDFDVIEGGELSFDYRANKQGPYIVSTSPNSAEVEESGRSYIRASTPETAETSLEKNQGDFKVSNRVGGSYSAPILAEKKFDPAEKVRQLLAFSAAKSNAYVLPTPVNIKETKTSSAPRTSASGSLHNLWHSSPLDEKKNEKDVDSKLSEPTIPRAHSVLKESDSDTSYTQLPRPSADGLLLPQVDFLSASDTKKIKRQAFSGPLTNKPLSVKPVSGGFSRLPVPQPSSPKASPNASPPLVSSPRISELHELPRPPGNQSSKPRVGHSAPLVLKNPEAAMTNKFPSVVLRAASPLPTPPVSRSFSIPSSGQRVVALNVSNTKYLDTPQVSKVDKAVSPPLTPMSQRASNISDLASHSSEIQVNAGGS	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma16g00467	622	MobiDBLite	consensus disorder prediction	454	523	-	-
	Gma16g00467	622	MobiDBLite	consensus disorder prediction	367	385	-	-
	Gma16g00467	622	MobiDBLite	consensus disorder prediction	387	405	-	-
	Gma16g00467	622	MobiDBLite	consensus disorder prediction	582	622	-	-
	Gma16g00467	622	Gene3D	Arfaptin homology (AH) domain/BAR domain	29	240	IPR027267	-
	Gma16g00467	622	CDD	BAR	37	225	-	-
	Gma16g00467	622	Pfam	BAR domain	48	225	IPR004148	GO:0005515\|GO:0005737
	Gma16g00467	622	SUPERFAMILY	BAR/IMD domain-like	29	228	IPR027267	-
	Gma16g00467	622	MobiDBLite	consensus disorder prediction	367	431	-	-
	Gma16g00467	622	MobiDBLite	consensus disorder prediction	596	622	-	-
	Gma16g00467	622	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	607	IPR037488	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma16g00467	Gma-Chr16	5034572	5043204	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma16g00467	-		-	gmx:100805134	1164.44