Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00462 ATGGCTCAAGACATCCTCAGAATCATACCCACTCTCCTCTCTGCAGCTTCAATCGCCGTCATGGTCACCAACAACCAAACCGTTCTCATCTTCGCTATCCGCTTCCAAGCCCACTTTTATTACTCACCCTCCTTCAAGTTTTTTGTTGCAGCAAATGGTGTAGTCGTTGCCTTGTCTTTGCTGACACTGGTACTGAACTTTCTCATGAAACGTCAAGCATCACCAAGATACCATTTCTTCCTATTCTTGCATGACATTGTGATGATGGTGTTGTTGATAGCTGGATGTGCAGCGGCAACTGCAATAGGTTACGTGGGGCAGTTTGGAGAGGATCATGTGGGTTGGCAGCCAATATGCGACCATGTGCGCAAGTTCTGCACAACAAACTTGGTTTCCCTTTTGCTCTCTTATTTTGCTTTCATTTCCTATTTCGGAATCACTCTTTTATCAGCCTACAAAATCGTCTCTTCTTCTCCCAAGAACTAA 486 0.4486 MAQDILRIIPTLLSAASIAVMVTNNQTVLIFAIRFQAHFYYSPSFKFFVAANGVVVALSLLTLVLNFLMKRQASPRYHFFLFLHDIVMMVLLIAGCAAATAIGYVGQFGEDHVGWQPICDHVRKFCTTNLVSLLLSYFAFISYFGITLLSAYKIVSSSPKN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00462 161 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 5 153 IPR006459 -
Gma16g00462 161 PANTHER CASP-LIKE PROTEIN 1F1 1 155 - -
Gma16g00462 161 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 1 155 - -
Gma16g00462 161 Pfam Casparian strip membrane protein domain 4 141 IPR006702 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00462 Gma-Chr16 4965743 4967493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00462 - - gmx:100808345 313.153