Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00456 ATGATGAATTATTTCCCGGACGAGGTAAtAGAGCACATATTTGACTATGTGGTGTCACACAGTGATCGAAATGCTTTGTCTTTGGTGTGTAAAAGTTGGTACAGGATAGAGAGGTGTACGAGGCAAAGGGTGTTCATAGGGAACTGTTACTCCATCACTCCGGAGAGGTTGATCCAGAGGTTTCCTGGTCTAAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTGCCTTATGATTGGGGTGGCTTTGTGCATCCATGGATTGAGGCACTGGCCAAGAACAAGGTTGGCTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTCTCTCGGTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCCACTGATGGCCTTGCTGCTTTAGCTGCAAATTGCAGGTTTCTTAGGGAGCTGGATCTGCAAGAAAATGAGGTTGAAGATCACAAAGGCCAGTGGCTAAGTTGCTTTCCTGACAACTGCACATCACTTGTTTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCACTAGAGAGACTTGTGGCCAGATCTCCTTACCTGAAGAGTTTAAAGCTGAATCGTTCAGTGCCCTTTGATGCACTGCAAAGGATAATGATGCGAGCACCTCAATTATCGGATTTGGGTATTGGATCATTTGTCCATGATCCAGAATCAGAGGCCTACATAAAGCTTAAGAATACCATTCTCAAGCGCAAGTCCATAACCAGTTTGTCAGGATTTTTGGAAGTTGCTCCTCATTGTCTTGCAGCAATATATCCTATTTGCCCGAACTTAACATCCTTGAACTTGAGCTATGCAGCAGGCATTCAGGGTAGTGATCTGATAAAACTGATTCGTCACTGTGTGAAACTTCAGCGCTTATTGATAATGGATTGCATTGGAGACAAAGGACTTGATGTTGTAGCTACTTCATGTAAAGACTTGCAAGAATTGAGGGTGTTTCCATCTGTTCCCTTTGGAAATCCAGCAGCCGTCACAGAAAAAGGGCTGGTTGCAATATCAATGGGTTGCCCTAAGCTTCACTCATTGCTCTATTTCTGCCACCAGATGACAAATGCTGCACTCATAACGGTGGCTAAGAACTGCCCGAATTTTATCCGATTCAGGCTGTGTATCCTTGATGCAACAAAACCCGACCCTGATACAATGCAGCCACTGGATGAAGGTTTTGGCGCAATTGTTCAGTCTTGCAGGCGACTCAGGCGCCTATCCCTCTCGGGGCAATTGACCGACCAGGTTTTCCTTTACATAGGAATGTACGCTGAGAAGCTTGAAATGCTGTCCATTGCATTTGCTGGGGAGAGCGACAAGGGAATGCTCTATGTGTTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATTAGAGACTGCCCTTTTGGCAATGTGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACCGTCGGAGCCTGCAAGTTGCTAGCGAAGAAGATGCCGAGGTTGAATGTGGAGATCTTCAATGAAAACGAGCAAGAAGATTGTAGTCTGGAAGATGGGCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCTGAATATGTATGGACTCTATAG 1719 0.4549 MMNYFPDEVIEHIFDYVVSHSDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYDWGGFVHPWIEALAKNKVGLEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAALAANCRFLRELDLQENEVEDHKGQWLSCFPDNCTSLVSLNFACLKGEVSLGALERLVARSPYLKSLKLNRSVPFDALQRIMMRAPQLSDLGIGSFVHDPESEAYIKLKNTILKRKSITSLSGFLEVAPHCLAAIYPICPNLTSLNLSYAAGIQGSDLIKLIRHCVKLQRLLIMDCIGDKGLDVVATSCKDLQELRVFPSVPFGNPAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGQLTDQVFLYIGMYAEKLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNVALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQKVEKMYLYRTLAGKRKDAPEYVWTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00456 572 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 3 569 - -
Gma16g00456 572 SMART LRR_CC_2 125 150 IPR006553 -
Gma16g00456 572 SMART LRR_CC_2 100 124 IPR006553 -
Gma16g00456 572 SMART LRR_CC_2 284 309 IPR006553 -
Gma16g00456 572 SMART LRR_CC_2 426 449 IPR006553 -
Gma16g00456 572 SMART LRR_CC_2 366 390 IPR006553 -
Gma16g00456 572 SMART LRR_CC_2 475 500 IPR006553 -
Gma16g00456 572 Gene3D Ribonuclease Inhibitor 42 572 IPR032675 -
Gma16g00456 572 Pfam F-box 3 42 IPR041567 -
Gma16g00456 572 Gene3D - 1 41 - -
Gma16g00456 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 3 569 - -
Gma16g00456 572 Pfam Transport inhibitor response 1 protein domain 62 108 IPR041101 -
Gma16g00456 572 SUPERFAMILY RNI-like 16 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00456 Gma-Chr16 4922257 4924671 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00456 - - gmx:100788209 1152.12