Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00449 ATGAGCAGTTGGAGAAGCCTTCTTCTGCGAATTGGGGACAAGAGCCCCGAATATGGACCCTCCTCCGATTACAAAGATCACATTGATACGTGCTTTGGCGCCCTTCGCCGCGAGCTCGACCACTCCCAATCCGAGATTCTCGAGTTCCTTCTCATGTGTGCTGAGCAATTGCCTCACAAGATTCCTCTGTATGGTACCCTGATTGGCTTAATTAACTTGGAAAATGAAGACTTTGTGAAACAACTAGTGGAGAAAACTCAAAGTAAATTTCAGGATGCCTTAGATTCTGGAAACTGCAACGGGGTTCGTATTCTAATGCGGCTTTTGACTGTTATGATGAGCAGTAAGGTTCTTCAACCAAGCTCTTTGGTGGCTGTGTTCGAAACATTTTTATCATCAGCTGCCACAACAGTAGATGAGGAGAAAGGGAATCCCTTATGGCAGCCATGTGCTGACTTTTACATAACTTGCATTTTATCATGCCTCCCATGGGGTGGAGCAGAACTTACTGAGCAAGTTCCTGAAGATATCGAGAGAGTGATGGTTGGTGTAGAAGCTTACTTGAGCATCAGAAAGCATACATCAGATACTGGCTTATCCTTTTTTGAGAATGATGATGAAAATGGGGAAGGTCTTACTGACAAGGACTTTTTGGAAGATTTATGGGATAGAATACAGGTTTTATCAAGCAACGGATGGAAGGTTGACAGCGTTCCAAGACCTCATCTTTCATTTGAAGCTCAGCTGGTTGCTGGGAAGTCTCATGAATTTGGGCCAATATGCTGCCCCAGCTTACCAAGCCTGCCTTCAGTCCCTTCTGGCGTGTCTATTGGTAAACAGAAGCATGAAGCAGAATTAAAATATCCTCAAAGTATACACCGGCTTAACATATTTCCTCCTAGTAAAATTGAGGATCTACAGCCTATAGACAGATTTGTTATGGAAGAGTATCTCCTAGATGTGCTTCTGTTCTTAAATGGCTGTCGAAAGGAATGTGCTTCTTTCATGGTTGGCCTGCCAGTTTCCTTCAGATACGAGTACCTCATGGCGGAAACAATATTCTCTCAGCTGCTGATGCTACCACAACCACCTTTCAAACCAGTATATTACACATTGGTTATTATTGACCTTTGTAAGGCTCTTCCTGGAGCCTTTCCTGCAGTTGTAGCTGGAGCTGTTCGTACTCTCTTTGAGAGGATTGCTGATTTGGATATGGAGTGTCGGACGCGTCTGATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATCTGGCCATGGGAAGAGTGGGCTTATGTCCTAGACCTCCCAAGGTGGGCCCCTCAACGTGTCTTTGTTCAAGAGGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTTAAGCAGAGTATTGAAAATGCACCTGGTTTAGAAGAATTGCTTCCTCCAAAGGGTGGGCCGAACTTTAGTTTTGGTGCAGAAGATGATAAAGAAAGCAATGAACATGTACTGTCTGGACAGCTCAACAACATGGTTAAAGGAAAGGCACCTGTCCGTGAAATAATCTCATGGATTGATGAAAGTGTGCTTCCAAATAATGGTCTAGAAGTTACCCTCAGAGTGGTTGTACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATGACTGTCTTGGAGAGATATGGGCAAGTCTTTGCAAAATTATGTCCTGACCAGGATAAGCAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAGAGTAATACCCAAATGACAGCAATAGCTATTGACAGGATGATGGGTTATCGGCTTGTTTCAAATCTGGCTATTGTGAGATGGGTCTTCTCAGCAGAGAATATTGAGCAATTTCATATGTCAGATCGTCCTTGGGAGATTCTTAGAAATGCAGTAAGCAAGACACACAATCGTATTTCTGATCTAAGGAAAGAAATATTATCTCTTAAAAAGAATATTTCATCATCTGAAGAAGCTGCCAAGGAAGCAAAAGCAGAGTTAGATGCTGCAGAGTCAAAACTTACACTAGTGGATGGTGAACCAGTTATTGGCGACAATCCTGCTAGGTTGAATAGATTGAAATCACATGCTGAAAAGACAAAGGAGGAGGTGGTGTCTCTTCAAGAATCTTTAGAAGCCAAGGAAGCTCTTCTTTCCCGAGCAATTGAGGAAAATGAGGCATTGTTTCTCTTGTTGTACAAAAGCTTCTCAAACGTGTTGACAGAGCGCCTTCCTGAAGGATCTAGAACACTGCATGAGTTGAAGTCTGCACAAGTTGATGTGGTGATGGCAGTGGACCCTGAAGAGCCATCGTCAATGGAATTAGACAACCAGAATCAGAGACCTCAAAACAGTCATACAAATGGCGAGAAGAAAGGTGGTGCTTATAATGTAGGTGAAAAGGAGCAGTGGTGTATCACCACTTTGGGCTATGTGAAGGCCTTCTCTAGGCAGTATGCTGCTGAGATATGGCCCCATGTTGAGAAGTTGGATGCAGAGGTATTGACAGAAGATGCACCTCTTCTTTTTCGGTCAGCTGTTTATTCTGGTCTTCGAAGACCAATTCACGAGGCTTGA 2592 0.4336 MSSWRSLLLRIGDKSPEYGPSSDYKDHIDTCFGALRRELDHSQSEILEFLLMCAEQLPHKIPLYGTLIGLINLENEDFVKQLVEKTQSKFQDALDSGNCNGVRILMRLLTVMMSSKVLQPSSLVAVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELTEQVPEDIERVMVGVEAYLSIRKHTSDTGLSFFENDDENGEGLTDKDFLEDLWDRIQVLSSNGWKVDSVPRPHLSFEAQLVAGKSHEFGPICCPSLPSLPSVPSGVSIGKQKHEAELKYPQSIHRLNIFPPSKIEDLQPIDRFVMEEYLLDVLLFLNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFSFGAEDDKESNEHVLSGQLNNMVKGKAPVREIISWIDESVLPNNGLEVTLRVVVQTLLNIGSKSFTHLMTVLERYGQVFAKLCPDQDKQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENIEQFHMSDRPWEILRNAVSKTHNRISDLRKEILSLKKNISSSEEAAKEAKAELDAAESKLTLVDGEPVIGDNPARLNRLKSHAEKTKEEVVSLQESLEAKEALLSRAIEENEALFLLLYKSFSNVLTERLPEGSRTLHELKSAQVDVVMAVDPEEPSSMELDNQNQRPQNSHTNGEKKGGAYNVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLTEDAPLLFRSAVYSGLRRPIHEA 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00449 863 Pfam MIF4G like 497 826 IPR015174 GO:0016070
Gma16g00449 863 Coils Coil 695 729 - -
Gma16g00449 863 Gene3D - 298 481 - -
Gma16g00449 863 Coils Coil 637 685 - -
Gma16g00449 863 MobiDBLite consensus disorder prediction 777 796 - -
Gma16g00449 863 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Gma16g00449 863 Pfam MIF4G domain 21 192 IPR003890 GO:0003723|GO:0005515
Gma16g00449 863 Gene3D - 3 270 - -
Gma16g00449 863 Gene3D - 489 849 - -
Gma16g00449 863 SUPERFAMILY ARM repeat 2 295 IPR016024 -
Gma16g00449 863 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Gma16g00449 863 SUPERFAMILY ARM repeat 478 845 IPR016024 -
Gma16g00449 863 MobiDBLite consensus disorder prediction 774 800 - -
Gma16g00449 863 Pfam MIF4G like 343 467 IPR015172 GO:0016070
Gma16g00449 863 PANTHER CAP BINDING PROTEIN 2 858 IPR027159 GO:0000339|GO:0005846|GO:0006406
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00449 Gma-Chr16 4816476 4832892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00449 K12882 - gmx:100811738 1673.29