Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00448 ATGCTTAGAACATTAGCTAGGGTGTTCAAGCGAGCCACCCTTGCCAATGACTTGCTTCAAAAACGCAGCAGATTCTATGCAACCACGGTTGGTGGAAGAAGTGACAGGTTAGAAGGAAAAGTGGCACTCATAACTGGATCAGCAAGTGGACTCGGCAAGGCCACGGCCCATGAGTTTGTCCAGCATGGAGCCCAAGTAATCATTGCTGACAATGACACCAAACTAGGCCCACAAGTTGCAAAAGAGTTGGGCCCATCAGCCCACTACACAGAGTGCGACGTCACTGTGGAGGCCCAAGTGGCGGATGCCGTGAACGTTGCCGTGGCCCACTATGGCAAGCTGGACATCATGTACAACAATGCGGGCATCCCAGGCCCATCAATTCCACCAAGCATAGTAGACCTAGACCTTGATGAGTTTGATAGAGTCATGAGGATCAACATAAGGGGAATGATTGCTGGTATAAAGCATGCGGCCCGGGTCATGATTCCAGTGGGATCAGGGTCCATTCTATGCACATCTAGCATAAGTGGGGTTTTGGGTGGGCTTGGGCCTCATCCTTACACAATATCAAAGTTTACAATACCAGGGGTAGTGAAATCTTTGGCTAGTGAGCTATGCAAAGTTGGGATTAGGATCAATTGCATATCACCAGCTCCAATTCCTACACCTATGGTTTTGGCACAAATTGGAAAGTTTTATCCTGGTTTAACCCAAGAACAGATAGTGGGCATTGTGAATGGGTTTGGTGAGCTCAAAGGTGCTAAGTGTGAGGACATTGATGTGGCAAAGGCTGCATTGTACTTAGCATCAGATGAAGCAAAGTTTATTTCAGGCCAAAATCTCATTGTGGATGGAGGGTTCACCAGCTTTAAAAATCTTACATTCCCTTCTCCAGATCAAACTGCTTAA 912 0.4715 MLRTLARVFKRATLANDLLQKRSRFYATTVGGRSDRLEGKVALITGSASGLGKATAHEFVQHGAQVIIADNDTKLGPQVAKELGPSAHYTECDVTVEAQVADAVNVAVAHYGKLDIMYNNAGIPGPSIPPSIVDLDLDEFDRVMRINIRGMIAGIKHAARVMIPVGSGSILCTSSISGVLGGLGPHPYTISKFTIPGVVKSLASELCKVGIRINCISPAPIPTPMVLAQIGKFYPGLTQEQIVGIVNGFGELKGAKCEDIDVAKAALYLASDEAKFISGQNLIVDGGFTSFKNLTFPSPDQTA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00448 303 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 7 300 - -
Gma16g00448 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 112 123 IPR002347 -
Gma16g00448 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 176 IPR002347 -
Gma16g00448 303 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 207 IPR002347 -
Gma16g00448 303 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 289 IPR036291 -
Gma16g00448 303 Pfam Enoyl-(Acyl carrier protein) reductase 46 289 - -
Gma16g00448 303 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 7 300 - -
Gma16g00448 303 PRINTS Glucose/ribitol dehydrogenase family signature 41 58 IPR002347 -
Gma16g00448 303 PRINTS Glucose/ribitol dehydrogenase family signature 112 123 IPR002347 -
Gma16g00448 303 PRINTS Glucose/ribitol dehydrogenase family signature 162 178 IPR002347 -
Gma16g00448 303 PRINTS Glucose/ribitol dehydrogenase family signature 188 207 IPR002347 -
Gma16g00448 303 PRINTS Glucose/ribitol dehydrogenase family signature 209 226 IPR002347 -
Gma16g00448 303 PRINTS Glucose/ribitol dehydrogenase family signature 252 272 IPR002347 -
Gma16g00448 303 Gene3D - 30 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00448 Gma-Chr16 4802061 4805545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00448 37 289 Acyl Lipid Metabolism Gene Families AT1G63380 30.038 3.62e-24 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00448 - - gmx:100808525 568.155