Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00442 ATGAGGCAGCACAAGCAAGTGTCCTCCATTAACCGGCGACCCACCGTTCTTTATCTGGTGTGCGTCGCAGCATTGTTTTCCCTCCTCCTCTTCTACACCCAATCCTCTTTCTTCTCAGATGCCGTCTCTTCAGATCGCGATTCCGAAACAATCCACGTTTTGTCTAACTTTCAGTCCAGTGTGAAGCAATGTGTGGATAACAGGGGGCTTGGACTCACTGCACATGTTATTGACCATTGCAAATTAATCCTTAAATACCCTGAAGGTACCAACAGCACTTGGTACAATGCACAGTTTAAGAAATTTGAGCCTTTGGAGTACAATTATGATTTGTGTGAGACAATCCTATTGTGGGAACAGTATCGCAACATGACTACGGTGTTGACCAGAGAGTATCTTGATGCTCGCCCTGGTGGTTGGGTGGATTATGCTCCACAAAGGATAGCGCAGTTGGGGGCAAAGAAGTGCACTAACAAGACACTTTGTGAAGAGAACCTCGATGTGTTATTACCTGCAAAGCCCCCATTTCATCCACGGCAGTTTCGAACTTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTGAAGACTAGATTTGGGAAAGAAATTGATAGTCATGATGCTGTTTTTCGAGACAATGAGGCCCCTGTTAATGAGAAATATGCCAAATATGTTGGTCTTAAGAGGGATTTCCGTCTAGTAGTAAGAGGTGCTGCTCGTAACATGGTCCCCATTCTAAACGGGTCTGACAATGAGGTACTCATAATCAAAAGTCTGACACATAGAGAAATCAATGCAGTTATAAAGACTATACCCAATCCAGTCTATCTCTTCCAAGGAATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTATTGAGTTAGCACTCTCCATGTGTGATATTATTGATATATATGGCTTCACTGTTGATCCAGGATACACTGAATGGACAAGATACTTCTCTCAGCCTAGGAAGGGACACAACCCACTTCAAGGAAGAGCATACTACCAACTCCTAGAATGTCTTGGGGTAATTAGAATTCACTCTCCCATGAGGTCTAAGAGGATGGAAGACTGGTCAGATATACCTAGTAGACAAATGATAAGCCAAGCACATGCAGCAGCTTTGCGCTTAAAAAGGAGTCAAGCTGGTCAGGGTGGTGACTTAGGGCAGTTTGGCAATTGTAAGGTGTGGGGCAATGTCAATCCAGACAAAAGTGGACCTGTCTCGGGATCACCAGACATGAGTGATGTCAGGAGATATTCAAATTATAGTAAATGGGAAGTCATGCCTTTTGAGAGTTTGAGGAAAGAAGCACGGGATCATTATAACCAGATGCAAGGGGTCTCTGTATATAAAATGGATGGCAATAAGTTGGATGATCTAGTCTGTGTGAGACATTCCTTAAAATCCGAGAGCACAACACGAATCTCAACTCCAAGGAAAATGAGGTTTACAATGGATAGTGCTTAG 1479 0.4368 MRQHKQVSSINRRPTVLYLVCVAALFSLLLFYTQSSFFSDAVSSDRDSETIHVLSNFQSSVKQCVDNRGLGLTAHVIDHCKLILKYPEGTNSTWYNAQFKKFEPLEYNYDLCETILLWEQYRNMTTVLTREYLDARPGGWVDYAPQRIAQLGAKKCTNKTLCEENLDVLLPAKPPFHPRQFRTCAVVGNSGDLLKTRFGKEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDNEVLIIKSLTHREINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIIDIYGFTVDPGYTEWTRYFSQPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRMEDWSDIPSRQMISQAHAAALRLKRSQAGQGGDLGQFGNCKVWGNVNPDKSGPVSGSPDMSDVRRYSNYSKWEVMPFESLRKEARDHYNQMQGVSVYKMDGNKLDDLVCVRHSLKSESTTRISTPRKMRFTMDSA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00442 492 Pfam Glycosyltransferase family 29 (sialyltransferase) 169 240 IPR001675 GO:0006486|GO:0008373
Gma16g00442 492 Gene3D Glycosyl transferase family 29 114 351 IPR038578 -
Gma16g00442 492 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 6 474 IPR044782 GO:0008373|GO:0009846|GO:0009860
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00442 Gma-Chr16 4757221 4762428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00442 67 346 Glycosyltransferase AT1G08660 86.429 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00442 - - gmx:100800355 965.296