Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00434 ATGGGTGAACACGCAATTCCTCAATGTTTTCAGCATCTAATGGCGAAAAAATTGCTCTTTTTGTTGACCCTTTTGGAAATTCTCCTTTGTGGGCAATCCAAGTTTATGGTGTACAACACTTCCCAAGGCATAGTCCCTGGGAAGCTCAATGTTCATCTGGTAGCTCACACCCACGATGATGTTGGTTGGTTGAAGACCGTTGATCAGTACTATGTTGGTTCCAACAATTCAATTCAGGGGGCTTGTGTGCAAAATGTCTTGGACTCCATGGTGCATGCTCTTCTGGCTGACAAGAACAGAAAATTTATCTATGTTGAGATGGCCTTTTTCAAGCGATGGTGGAGAGATCAAAGTGAAGCTGTTCAGGATGTAGTTAAGAAACTCGTTAGTTCGGGTCAACTAGAGTTCATAAATGGTGCCATGGCTATGCATGATGAGGCAGTAACACATTACATAGACATGATTGATCAGACTGCACTTGGACATCAATTTCTAAAAGAGGAATTTGGTGTGACTCCCAGAATTGGTTGGCAAATTGATCCTTTCGGACATTCTGCTGTGCAGGCTTACCTGTTGGGAGCTGAAGTTGGCTTTGACTCATTTTTCTTTGGTCGGATAGATTACCAAGATAGGGCTAAGCGCAAAAAGGAGAAGAGTCTTGAGGTTATCTGGCAGGGTAGCAAGAGCCTTGGCCCCTCTGCCCAGATCTTTGCTGGAGCATTCCCAGAAAATTATGAGCCACCTTCAGGATTTTACTTTGAAGTTAATGATGCCTCACCAATAGTTCAAGATAACATGCAATTGTTTGATTACAATGTCCAAGATCGAGTGAATGACTTTGTTGCTGCTGCATTATTACAGGCAAACATAACTCGAACAAATCACATAATGTGGACAATGGGAACTGATTTTAAGTATCAATATGCACATACATGGTTCCGACAGCTGGACAAGCTTATTCATTATGTAAACATGGATGGACGTGTCAATGCTCTGTACTCTACACCATCCATATATACTGATGCAAAATATGCTACAAATGAGTCCTGGCCAATCAAGACTGATGATTTTTTTCCTTATGCAGATCGAGCAAATGGTTACTGGACAGGATACTTTACCAGTAGGCCAGCTATCAAACGCTATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAACTAGAATTTTTTAGGGGGAGAGTGAATTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCGCAACACCATGATGCAGTCACTGGCACAGAAAAGCAGCATGTGGCCAATGATTATTCTAAGCGATTGTCAATAGGCTACAAGGAGTGTCCACTTTTGAACATAAGTTACTGTCCTGCATCAGAAGTTGATCTGGTTCAAGGAAAGAATTTGGTTATTGTAGTTTACAACTCTCTAGGTTGGAGGAGGAATGAAGTGATTCGGATTCCGGTTATTGAGGCCAATGTTAGAGTTCATGACTCTAATGGTATAGAAATAGAATCTCAACTTCTTCCTCAGGCTGAGAAATATGTAGACTTAAGAAATTACTACGTGAAGGCATATCTAGGACAAACTCCACCCAAGGCACCTAAGTACTGGCTTGCATTTACAGTTTCTGTACCGCCACTTGGTTTTAGCACATACACTGTCTCAACTGCCAAAAGGACAGGGTCCACAAGATCATCAGTAGATATATATAAGAGTAGTGAAAAGTCTAAATTTGATGTTGGTCAAGGAAATTTGAAGCTTACATTTTCTATGGATCAAGAGAAGTGTACCAATTATGTTAATATAAGAAACCTGGTCGAGGAACAGGTTGAACTAAGTTACCTATACTATTCTGGATACAATGGAACTAATCAAAAAGATCCACAGAATTCTGGGGCCTATATCTTCCGTCCAAATGGCACACATCCCATAAACCATGAAAAAAAGGTTCCATTGACTGTTTTGCATGGACCTGTGCTAGATGAAGTGCACCAACAAATCAATCCATGGATATATCAGATTACCAGACTATACAAAGGAAAGGAGCATGTTGAAGTGGAGTTTATTGTTGGCCCTATACCAATTGAAGATGGAATTGGCAAAGAAGTTGCCACTCGGATTTCAACTACTATGGAAACCAACAACATGTTTTACACGGATTCTAATGGACGTGATTTTATCAAAAGGATACGAGACTACAGAACAGACTGGGACCTAGAAGTGAACCAACCTGCTGCTGGAAATTATTACCCTATTAATCTTGGGATATACACAGAGGATAATAAAACAGAATTCTCAGTTTTGGTGGATAGAGCTATTGGAGGATCCAGCTTACAAGATGGACAAATAGAGCTGATGGTTCACAGGAGATTACTACTTGATGATTCAAGAGGTGTTGATGAGGCTCTAAATGAAACAGATTGTGTCGGTGATGATTGCAGGGGTCTAACTGTCCAAGGTAAATTTTACTACAGAATAGACCCCTTGGGTGAGGGCGCTAAGTGGCGTCGTACTTTTGGCCAGGAAATATATTCTCCACTTCTGTTAGCCTTTGCTGAAAAGGATGATAAAGATGACTGGATGAATTCCCGTGTATTAACATTTTCAGGAATTGATTCTTCTTATGCATTACCTGATAATATTGCTATTATAACATTACAGGAACTTGATGATGGGACAGTTCTGCTTCGGTTAGCACATCTATATGAGATTGAAGAAGACAAAGATCTCTCTGTAATTGCAACTGTGGAGCTGAAAAAGCTCTTGCCTGGGAGGAAGATCAAGGAGGTGAAGGAGATGAGTTTATCTGCCAATCAAGAAAGGACAGAGATGGAGAAGAAAAGACTTGCTTGGAAAGTAGAAGGCTCTTCTGGAAGTAAGCAAGTTTCAAGGGGAGGGCCAGTTGATCCAAAAGAGCTAAACGTGGAGCTTGCTCCTATGGAAATTCGCACTTTTATCCTTGACTTTGATGATGTGTCTAACCAACTTTTTGATGCATTGTAG 3003 0.4073 MGEHAIPQCFQHLMAKKLLFLLTLLEILLCGQSKFMVYNTSQGIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVHALLADKNRKFIYVEMAFFKRWWRDQSEAVQDVVKKLVSSGQLEFINGAMAMHDEAVTHYIDMIDQTALGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSFFFGRIDYQDRAKRKKEKSLEVIWQGSKSLGPSAQIFAGAFPENYEPPSGFYFEVNDASPIVQDNMQLFDYNVQDRVNDFVAAALLQANITRTNHIMWTMGTDFKYQYAHTWFRQLDKLIHYVNMDGRVNALYSTPSIYTDAKYATNESWPIKTDDFFPYADRANGYWTGYFTSRPAIKRYVRLMSGYYLAARQLEFFRGRVNSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYSKRLSIGYKECPLLNISYCPASEVDLVQGKNLVIVVYNSLGWRRNEVIRIPVIEANVRVHDSNGIEIESQLLPQAEKYVDLRNYYVKAYLGQTPPKAPKYWLAFTVSVPPLGFSTYTVSTAKRTGSTRSSVDIYKSSEKSKFDVGQGNLKLTFSMDQEKCTNYVNIRNLVEEQVELSYLYYSGYNGTNQKDPQNSGAYIFRPNGTHPINHEKKVPLTVLHGPVLDEVHQQINPWIYQITRLYKGKEHVEVEFIVGPIPIEDGIGKEVATRISTTMETNNMFYTDSNGRDFIKRIRDYRTDWDLEVNQPAAGNYYPINLGIYTEDNKTEFSVLVDRAIGGSSLQDGQIELMVHRRLLLDDSRGVDEALNETDCVGDDCRGLTVQGKFYYRIDPLGEGAKWRRTFGQEIYSPLLLAFAEKDDKDDWMNSRVLTFSGIDSSYALPDNIAIITLQELDDGTVLLRLAHLYEIEEDKDLSVIATVELKKLLPGRKIKEVKEMSLSANQERTEMEKKRLAWKVEGSSGSKQVSRGGPVDPKELNVELAPMEIRTFILDFDDVSNQLFDAL 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00434 1000 Gene3D Glycoside hydrolase family 38, central domain 409 454 IPR037094 GO:0004559|GO:0006013
Gma16g00434 1000 PANTHER ALPHA-MANNOSIDASE 27 991 - -
Gma16g00434 1000 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 880 986 IPR041147 -
Gma16g00434 1000 Gene3D Glycoside hydrolase 38, N terminal domain 49 329 IPR027291 -
Gma16g00434 1000 PANTHER ALPHA-MANNOSIDASE 27 991 - -
Gma16g00434 1000 Gene3D - 866 992 - -
Gma16g00434 1000 SUPERFAMILY Glycoside hydrolase/deacetylase 38 362 IPR011330 GO:0005975
Gma16g00434 1000 Gene3D - 456 578 IPR013780 -
Gma16g00434 1000 Coils Coil 927 947 - -
Gma16g00434 1000 Pfam Glycosyl hydrolases family 38 C-terminal domain 583 797 IPR011682 GO:0004559|GO:0006013
Gma16g00434 1000 Gene3D Glycoside hydrolase family 38, central domain 330 408 IPR037094 GO:0004559|GO:0006013
Gma16g00434 1000 CDD GH38N_AMII_LAM_like 49 325 - -
Gma16g00434 1000 Pfam Glycosyl hydrolases family 38 N-terminal domain 50 361 IPR000602 GO:0004559|GO:0006013
Gma16g00434 1000 Gene3D - 579 845 - -
Gma16g00434 1000 Pfam Alpha mannosidase middle domain 367 447 IPR015341 GO:0004559|GO:0006013
Gma16g00434 1000 SUPERFAMILY Families 57/38 glycoside transferase middle domain 365 448 IPR028995 -
Gma16g00434 1000 SUPERFAMILY Galactose mutarotase-like 445 989 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma16g00434 1000 SMART Alpha_mann_mid_2 366 440 IPR015341 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00434 Gma-Chr16 4632056 4648319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00434 14 903 Glycoside Hydrolase AT5G13980 70.575 0.0 1370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00434 K01191 - gmx:100776282 1960.65