Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00422 ATGTCTCTATGGAATTCACCTTCTTCAACATCTCGAGTTCAGAGTCCTCAAAATACCCCTATAATTCCTGCTAGCTGCTCTCCAAAACTCGTGAAACGAATGCAACAAGAAACCTGTTACAAATGTGATCAACGAGGACATTGGTCTTATTACTGTCCTTACAAATCCCCCAAAACTAAACCCATCTCACCCTCACCCAAGCAAGATTCCACAGTTTCCTACAAAAGGGCTCATGGATCTTGTGGGTACGGTGTGACTGAGGATGAATTGCTCAATGGCAATAGCAACAGCATTGCTCGTTTAAAGCAAAGCAGGCAAAGAACTCTACATGATTTTTGGGATGGATGCCAAAGCCAAAATGATGGTTCGCAAGAACAGATCAAAAGGATGAGAATCACAGACTGTTCTGAGAATCCAAACATTGAAGGTGCTAGTGCAACACAAAATGCTGCCAATGTGAAACGTGATGGTTTTTCAGAATTGGAGTCTGCTGCGGATGATATAGAATTCATGAACTCAGTCTCATGGGAAACTATTGAGGCAGAAGCAATTCTATCATTATCTCGTCGATCAACAccttcaaggatcccttcaaggatccGTTGGCGACAAATTATGTTTCAGAAGCGCATTTTCTCTGATGATTCATTTGAAATAGACAAGTCCAAGGAAAATTCCCTTACTATGGATGAGCAGAATAATCTCTTTGAGGAGAACAAAATGAGATTTGCTCAACTCCAAGACGAGTATGTCAAGACCGAAGCTTCACTTGAAGCATCAAACCAGCATAAGCAATTGCTTTGTGAACAGGTCTCTGATCTCAAGACCATGCTTGATGAAAAACAAAATCAATTAAAATGTTGTGAGTTGGAGACCTTGAAGATAGAGACTCGTCTTGGTGATCTGAAAAGAAGAATGTTGGAGACCCATTTTACATTGAAGGAAAGAGTTGAACAAACAGAAGAGGCAAGGAAACAAAGTGAAGAAAGACAAGCAAAGCTGCAGTGA 1008 0.3958 MSLWNSPSSTSRVQSPQNTPIIPASCSPKLVKRMQQETCYKCDQRGHWSYYCPYKSPKTKPISPSPKQDSTVSYKRAHGSCGYGVTEDELLNGNSNSIARLKQSRQRTLHDFWDGCQSQNDGSQEQIKRMRITDCSENPNIEGASATQNAANVKRDGFSELESAADDIEFMNSVSWETIEAEAILSLSRRSTPSRIPSRIRWRQIMFQKRIFSDDSFEIDKSKENSLTMDEQNNLFEENKMRFAQLQDEYVKTEASLEASNQHKQLLCEQVSDLKTMLDEKQNQLKCCELETLKIETRLGDLKRRMLETHFTLKERVEQTEEARKQSEERQAKLQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00422 335 MobiDBLite consensus disorder prediction 1 24 - -
Gma16g00422 335 ProSiteProfiles Zinc finger CCHC-type profile. 39 53 IPR001878 GO:0003676|GO:0008270
Gma16g00422 335 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 1 332 - -
Gma16g00422 335 PANTHER OS07G0190500 PROTEIN 1 332 - -
Gma16g00422 335 Coils Coil 229 249 - -
Gma16g00422 335 SUPERFAMILY Retrovirus zinc finger-like domains 33 59 IPR036875 GO:0003676|GO:0008270
Gma16g00422 335 Coils Coil 310 335 - -
Gma16g00422 335 Coils Coil 264 291 - -
Gma16g00422 335 Gene3D - 2 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00422 Gma-Chr16 4503202 4504828 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00422 - - gmx:100804614 651.358