Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00418 ATGTCGTCTGTGCCGGCACGAACAGGGCGACAAAGACAGCGTTATGAGGACAATTTGCGCCTTGTCTCTGGATGTATTCCCTATAGATGGACAAAGGACAACACAGATCAAATGGGGGAAACCCGGGAGATAATAGAAGTACTTATGGTTTCTTCACCAAAACGTGATGACCTTGTATTCCCAAAGGGTGGATGGGAGGATGATGAGACTGTTACAGAAGCTGCTTGCCGCGAGGCTTTAGAGGAAGCAGGAGTTAAAGGAATACTAAGAGAAATTCCACTAGGAATATGGGAGTTCAGAAGCAAAACCAGTCAAGACTTATGTAGCGTGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACTGAAGAACTTGAGACATGGCCAGAGCAGAAAAACCACGCTCGCCAATGGTTAAACATAAAAGATGCATTCAAACTCAGCCGATATGACTGGATGTGTAATGCACTTGAGGCATTTTTGAGAGTAATGGCAGAAGACAGAAAGCCTGAGAACCAAGACCAGAATGTGGAACTTGAACCCCCTTCAATTGTAGAAGATATGCCAGAATGCCAAAGTATGTCACCTAACTGCTATAAGAGATCCTCTACTATGCAGCACCATGGTATGCCTCCTAAAGCCAATCTTCTGTCACGTGCTACTCGAGAAATAGCCATCCACTTTGGTTATTGA 699 0.4521 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWTKDNTDQMGETREIIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGILREIPLGIWEFRSKTSQDLCSVEGGCRGYMFALEVTEELETWPEQKNHARQWLNIKDAFKLSRYDWMCNALEAFLRVMAEDRKPENQDQNVELEPPSIVEDMPECQSMSPNCYKRSSTMQHHGMPPKANLLSRATREIAIHFGY 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00418 232 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Gma16g00418 232 Pfam NUDIX domain 47 155 IPR000086 -
Gma16g00418 232 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 165 - -
Gma16g00418 232 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Gma16g00418 232 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Gma16g00418 232 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Gma16g00418 232 CDD Nudix_Hydrolase_9 21 155 - -
Gma16g00418 232 SUPERFAMILY Nudix 16 176 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00418 Gma-Chr16 4449240 4454155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00418 K07766 - gmx:100794003 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00418 16 4449240 4454155 Gma16g01359 16 32530104 32535612 PCT
Gma16g00418 16 4449240 4454155 Gma02g00604 02 6006370 6010547 PCT
Gma16g01359 16 32530104 32535612 Gma16g00418 16 4449240 4454155 PCT
Gma02g00604 02 6006370 6010547 Gma16g00418 16 4449240 4454155 PCT