Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00408 ATGAAGAACAGAACATCAGGGTTTCTGAAGGAGATCATAGCAAATCTGAGCTCAATGGCAAAGTCAAAAACCATGGCGTTGAAGTCCAAAACAAACGCGATAAGGGATCGTTTGATCGTATTCTCACTGATGAAGAACAAGAAGTTCTTGATGAGTTCCCTCTCTGAGAAGTTCCATTCTGTGTGGGGGCAAAGTTCATCATCTCAACAACAAAAGGAAGATCATTGCTTATTGGAAGATGGCATCAGCAATGATGATCATCACCAAAAAAGCAAGGCCATAGTGTTGTACAACAGCAATGCACACTCATATGAAGCCTTGCCAAACCCTAGTGAAACCCTAGTGGTGGAGGAGGAACAAGACCAAGATGATGGCTTTGATGGTTACTACAATTATGATTGTGATGATGATGATGAAAAGTACCCGGATCTCACACACACACTTTTTGAGTCTGAGGATTTGGATCTTGGAGGGTCAGTGATTGATTTGGTGAAGAATTCTAAGGAAGAGGCAGGGAAAGAGTTTAAGCTGGAGGATGAGATTGACCTTGCTGCTGATCTTTTCATTTTGAAGTTTAGAAGGCAAATGGTGTTGCAGAAGCAAGAGTCATTGAAGAGGAAGAGGGAAAATGCTTGA 636 0.4182 MKNRTSGFLKEIIANLSSMAKSKTMALKSKTNAIRDRLIVFSLMKNKKFLMSSLSEKFHSVWGQSSSSQQQKEDHCLLEDGISNDDHHQKSKAIVLYNSNAHSYEALPNPSETLVVEEEQDQDDGFDGYYNYDCDDDDEKYPDLTHTLFESEDLDLGGSVIDLVKNSKEEAGKEFKLEDEIDLAADLFILKFRRQMVLQKQESLKRKRENA 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00408 211 Pfam Cotton fibre expressed protein 178 206 IPR008480 -
Gma16g00408 211 PANTHER COTTON FIBER PROTEIN 1 210 - -
Gma16g00408 211 PANTHER EMB|CAB67623.1-RELATED 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00408 Gma-Chr16 4348308 4348943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00408 - - gmx:100781263 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01039 19 38113992 38115166 Gma16g00408 16 4348308 4348943 GST
Gma16g00408 16 4348308 4348943 Gma02g00613 02 6051824 6053225 PCT
Gma02g00613 02 6051824 6053225 Gma16g00408 16 4348308 4348943 PCT