Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00378 ATGGGTAGGAGTCTAAGCCCTTTGGTGAGGCAAGAGCTGGCAAATCTTGAGAAAGATGAAGATAGCCGCAAATCCGCCATGAAGGCGTTGAAATCTTATGTGAAAGATTTGGATTTAGAGGCCATTCCTTTCTTTCTCGCAAAAGTTTCTGAGAGCAAAGAAAATTGTTCAGGGGAGTTCACAATTTCAATCTTTGAAGTTCTTGCTAGGGTTCACGGTGTCAAAATTGTTCCTTTGATAGACAACATCATGAGAACCATAGTAAAGACTTTGGCTTCAAGTGCAGGGTCCTTCCCTCTCCAACAGGCTTGCTCAAAGGTGGTTCCTGCAGTTGCAAGATATGGAATTGACCCCTCAACCCCAGAAGACAAAAGGAGGCACATAATTTGGTCCCTTTGCACGCCTCTTTCCAATTCTCTCTCGAGTTCTCAGGAGAGCCTTACTTCGGGTGCTGCCCTTTGCTTGAAGGCTCTGGTGGATTCTGATAATTGGAGGTTTGCTTCAGATGAATTGGTCAATCGGGTTTGCCAGAATGTTGCTGCGGCATTAGATGGAAAGTCTGGTCAAACCAACTCCCATCTTGGTCTGGTTATGTCGTTGGCCAGGCGCAATGCGTTGATCATTGAAGCGTATGCAAGGTTGCTCATACAATCTGGAATAAGAATACTGAATGCTGGCCTTGTGGAGGGGAATTCTCAGAAAAGGCTTTCATCAATTCAGATGATCAACTACTTGATGAGAAGTTTGGACTCCAGAAGCATATTCTCAGAGATTGAATTGATAATTGAGGAGATGGACAAGTGCCAATCTGATAAAATGGCATTTGTGCAAGGTGCAGCACTTGAGGCTTTGCAAACTGCCAAGAGAATTGCAAGTGATAAAAAGCCAAGATATGCAAAAAGTCCGGCTTCAGTGACAGGATCAAATTTTAGTAGGAGAGAGGAAGACTATATGGAGGGAGAGAATACTTCTTCTGGTGATGGAGAACATACTCCTTCTTCTCTTACACCTGAATCGCGGACATTTGACTTTTTCCCTGGATATGAATATGTTGATTCTCCTATTTCAAGCAACTTTGGACGAAGAAGTGTGACTAGGAAGCTTTGGAGTAATGAAAATGGAGGAGTTGATGTGTCTCTAAAGGATGGTTTGTTTTCACAAATAGGAAAAGAAAGTGCTTTGTTAGAGCATTCATTGATTCCAGAGTTTTCTGATGGAGAGGGAGACTATACAGAGGAGTTTGCTGGTTTCATGGGCAGAAATACCAGCCATGGAGTGTCCAAAAGTACCACCACAAGTCCACTAAGGTCACGCACTCAGGCAACTGTTGACAGCATAAAAATCTTTGAGACCCCTAGGAAGCTCATCCACTCTCTTCAAGATTCAAGTGATCTGTCTTTGGGTTGCTCTAAGAAGGAGCAGAATGGAAGGTATAGGAGTCTATCCTCAGACGACAACATGGAGTGGAGTCCATCTTGTAAGTATAACCAAAACGGTTTCTCAGATGACATGAACAAGTGTGATAGCGAAGTAATCGAAGGTTGTGCTGAGGTTGAGTTTCAAGGTGGCTCAGAGTCAGTCTCATCAACAAATGACAACAACATTCTTGTAGATGTCGAAAAGCAGATGCATACCAAAGTGGTTCCTGAAAATAGAAATGCCAAGACTAAATACAAATTGGTTTGTGGTCTTTCATGCGTTCTACTTGCAGTGGCTACTCCATTGCTTTGGATCAATAATCAAGATGAAGGCCATTATCTTGTCCCAACATAA 1773 0.4287 MGRSLSPLVRQELANLEKDEDSRKSAMKALKSYVKDLDLEAIPFFLAKVSESKENCSGEFTISIFEVLARVHGVKIVPLIDNIMRTIVKTLASSAGSFPLQQACSKVVPAVARYGIDPSTPEDKRRHIIWSLCTPLSNSLSSSQESLTSGAALCLKALVDSDNWRFASDELVNRVCQNVAAALDGKSGQTNSHLGLVMSLARRNALIIEAYARLLIQSGIRILNAGLVEGNSQKRLSSIQMINYLMRSLDSRSIFSEIELIIEEMDKCQSDKMAFVQGAALEALQTAKRIASDKKPRYAKSPASVTGSNFSRREEDYMEGENTSSGDGEHTPSSLTPESRTFDFFPGYEYVDSPISSNFGRRSVTRKLWSNENGGVDVSLKDGLFSQIGKESALLEHSLIPEFSDGEGDYTEEFAGFMGRNTSHGVSKSTTTSPLRSRTQATVDSIKIFETPRKLIHSLQDSSDLSLGCSKKEQNGRYRSLSSDDNMEWSPSCKYNQNGFSDDMNKCDSEVIEGCAEVEFQGGSESVSSTNDNNILVDVEKQMHTKVVPENRNAKTKYKLVCGLSCVLLAVATPLLWINNQDEGHYLVPT 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00378 590 PANTHER PROTEIN SINE1 1 590 - -
Gma16g00378 590 MobiDBLite consensus disorder prediction 295 338 - -
Gma16g00378 590 Gene3D - 3 319 IPR011989 -
Gma16g00378 590 SUPERFAMILY ARM repeat 11 286 IPR016024 -
Gma16g00378 590 MobiDBLite consensus disorder prediction 324 338 - -
Gma16g00378 590 PANTHER GEMIN2 1 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00378 Gma-Chr16 3948086 3950578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00378 - - gmx:100782340 1131.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01074 19 38844569 38847231 Gma16g00378 16 3948086 3950578 GST
Gma16g00378 16 3948086 3950578 Gma16g01395 16 32975733 32978415 PCT
Gma16g00378 16 3948086 3950578 Gma02g00648 02 6339039 6341821 PCT
Gma16g01395 16 32975733 32978415 Gma16g00378 16 3948086 3950578 PCT
Gma02g00648 02 6339039 6341821 Gma16g00378 16 3948086 3950578 PCT