Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00357 ATGGCTAAAATCTCCATTTTGTTGGTGGGGCTTTGGGTACTAGGAAGCTGGACAGGGTTGTTGGATGCAGAATACATGAAATACAAAGACCCTAAACAGTCGATCGACACACGCGTTGAGGATCTTGTTAGCAGGATGACTCTTGAGGAGAAAATTGGCCAAATGTTGCAGATTGAACGAAAATATGCATCTGCTGATTTGGTTAAGAAGTATTTTATTGTAGGGAGTGTAATGAGTGAGGGAGGGAGTGTTCCAGCTCCACAGGCTTCTGCTGAAACCTGGATTGACATGGTGAATGAATTTCAGAAGGGTGCTGTATCAACCAGGCTTGGAATTCCAATGTTTTATGGGATTGATGCTGTTCATGGCCACAACACTATTTACAAAGCAACTATTTTTCCTCACAATATTGGTCTTGGAGCCACCAGGGACCCTGAACTAGTTAAGAGGATTGGAGCTGCAACTGCCCTTGAAATTAGAGCAACAGGAATTCAATATACTTATGCACCTTGTATTGCAGTATGTAGAGATCCAAGATGGGGTCGCTGTTACGAAAGCTACAGTGAAGATCCTAAACTAGTTCAAGCTATGACTGAAATCATACCAGGATTGCAAGGGGAAATCCCTGACAATTTACCAAAGGGTGTCCCTTTTATCACTGGAAAAGAAAAAGTTCTTGCTTGTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGGATTGATGAGAACAACACTGTTATAGATAGAGATGGATTGATGAGAATTCACATGCCAGGCTACTTCAACTCAATCAGCAAGGGTGTGGCATCCATTATGGTCTCTTACTCCAGTTGGAACGGGGAAAAAATGCATGCTAACCAGGACCTTATTACTGGCTACCTCAAGAATACTCTCCATTTCAAGGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGGATCACCTCACCACCTCATGCAAACTTCACTTATTCAATTGAAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCAAAGCATTACACAGAATTCATAGATGTTCTAACCATGTTGGTGAAAAATAAGCACATTCCCATGAGTCGAATTGATGATGCGGTGAGAAGAATTCTGTGGGTTAAGTTCATGATGGGTATTTTTGAGAATCCTTTTGCTGATTACAGTTTGGCCAAATATTTGGGAATCCAGGAACACAGAAATTTGGCTAGGGAAGCAGTAAGGAAATCAATGGTCCTTCTGAAAAATGGTGAATCTGCTGACAAGCCTTTACTGCCTCTTCCTAAAAAGGCGCCAAAAATACTTGTGGCTGGAAGCCATGCTGATAATCTAGGATATCAGTGTGGTGGCTGGACCATAGAATGgcaaggagtcagtgggaacaatcttctcaaagGGACTACAATTCTCGCTGCTGTTAAAGACACTGTTGATCCTGAAACCACAGTGGTCTACAAGGAGAACCCAGATGTAGAATTTGTCAAATCCAATGAATTTTCCTATGCCATAGTTGTAGTAGGAGAGCACCCTTATGCTGAAATGCATGGTGACAGCATGAACTTGACAATCCCAGAACCTGGTCCTGAGATCATAACAAATGTCTGTGGAGCAATAAAATGTGTGGTTATCATTATTTCTGGTCGTCCTGTAGTTATTGAACCATATGTTGGTTCAATAGATGCACTAGTTGCTGCATGGCTTCCAGGTAGTGAAGGCCAAGGTGTTGCTGATGTTTTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAACTGCCAATGAATGCTGGAGATCCTCACTATGATCCCCTCTTCCCGTTTGGGTTTGGCCTTTCTACCGAACCTTCTAAGGCCCTTTTCTCCTCGTAG 1899 0.4165 MAKISILLVGLWVLGSWTGLLDAEYMKYKDPKQSIDTRVEDLVSRMTLEEKIGQMLQIERKYASADLVKKYFIVGSVMSEGGSVPAPQASAETWIDMVNEFQKGAVSTRLGIPMFYGIDAVHGHNTIYKATIFPHNIGLGATRDPELVKRIGAATALEIRATGIQYTYAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIIPGLQGEIPDNLPKGVPFITGKEKVLACAKHYVGDGGTINGIDENNTVIDRDGLMRIHMPGYFNSISKGVASIMVSYSSWNGEKMHANQDLITGYLKNTLHFKGFVISDFEGIDRITSPPHANFTYSIEAGVSAGIDMFMVPKHYTEFIDVLTMLVKNKHIPMSRIDDAVRRILWVKFMMGIFENPFADYSLAKYLGIQEHRNLAREAVRKSMVLLKNGESADKPLLPLPKKAPKILVAGSHADNLGYQCGGWTIEWQGVSGNNLLKGTTILAAVKDTVDPETTVVYKENPDVEFVKSNEFSYAIVVVGEHPYAEMHGDSMNLTIPEPGPEIITNVCGAIKCVVIIISGRPVVIEPYVGSIDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNAGDPHYDPLFPFGFGLSTEPSKALFSS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00357 632 Pfam Glycosyl hydrolase family 3 C-terminal domain 413 622 IPR002772 GO:0004553|GO:0005975
Gma16g00357 632 Pfam Glycosyl hydrolase family 3 N terminal domain 47 374 IPR001764 GO:0004553|GO:0005975
Gma16g00357 632 Gene3D - 21 397 IPR036962 GO:0004553|GO:0005975
Gma16g00357 632 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 5 632 - -
Gma16g00357 632 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 5 632 - -
Gma16g00357 632 PRINTS Glycosyl hydrolase family 3 signature 179 195 IPR001764 GO:0004553|GO:0005975
Gma16g00357 632 PRINTS Glycosyl hydrolase family 3 signature 133 152 IPR001764 GO:0004553|GO:0005975
Gma16g00357 632 PRINTS Glycosyl hydrolase family 3 signature 295 313 IPR001764 GO:0004553|GO:0005975
Gma16g00357 632 PRINTS Glycosyl hydrolase family 3 signature 109 125 IPR001764 GO:0004553|GO:0005975
Gma16g00357 632 PRINTS Glycosyl hydrolase family 3 signature 225 241 IPR001764 GO:0004553|GO:0005975
Gma16g00357 632 SUPERFAMILY (Trans)glycosidases 25 412 IPR017853 -
Gma16g00357 632 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 413 622 IPR036881 GO:0004553|GO:0005975
Gma16g00357 632 Gene3D - 398 624 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00357 Gma-Chr16 3729246 3740379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00357 1 627 Glycoside Hydrolase AT5G20950 69.856 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00357 K05349 - gmx:100779642 1211.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01104 19 39172808 39176692 Gma16g00357 16 3729246 3740379 GST