Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00354 ATGCAGACGAGGACTGTTCAAGTTAAGCAGCTTTCAGATCTAGCTGGTGTAAGAGAGATTCACGAGTTCTTCTCCTTTTCTGGAGAAATCGAGCATGTTGAGATCCTGAGTGAAGATGGGAAATCAAAGACTGCATATGTGACATTTAAAGATCCCAAAGCACTTGAAATTGCATTATTATTATCGGGAGCAACAATAGTAGACCAGGTTGTGAAGATAACTCCAGCTGAGAACTATGTACCAAATCGTGAGATGCAGGAAGTAAGAGTGGTGGAAAATGCTATAAATGTTGTTCCTTCTGAGAATTCTGAGAACGTCTCCTCAAATATTGAGGAGGGGATAGCCAGCCCCACCAATAGAAGAATCTACCTTAGTAGAGCACAAGATGCAGTTACAAATATGCTGGCGAAAGGTTCAGCAATAAGACAAGATGCAGTGAACAAAGCTAAAGCATTTGATGAAAAGCATCAATTGACTGCCAATGCATCTGCAAAGGTCATTTCTTTTGACAAGAGAGTTGGACTGACGGAGAAATTGACAGTAGGCATCGCTGCAATGAACCAGAAAGTCAAGTCTGTGGATCAGAGGCTTCAGGTGTCAGATAAAACAATGGCAGCAATAATTGCAGCTGAGAGGAAGATAAATGACACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACAGCATGGTTCAATGGTGCTTTTAGCAAGGTGGCAAAGGCTGGACATGTTGCAAGTTCTAAAACTAGAGAAAAATTTCATTTGGCTGTTTCAAACTTGACATCAAAGGAACCGTCAGTGGCTGCTGCATAG 822 0.4185 MQTRTVQVKQLSDLAGVREIHEFFSFSGEIEHVEILSEDGKSKTAYVTFKDPKALEIALLLSGATIVDQVVKITPAENYVPNREMQEVRVVENAINVVPSENSENVSSNIEEGIASPTNRRIYLSRAQDAVTNMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVISFDKRVGLTEKLTVGIAAMNQKVKSVDQRLQVSDKTMAAIIAAERKINDTGSAVKTSRYVTAGTAWFNGAFSKVAKAGHVASSKTREKFHLAVSNLTSKEPSVAAA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00354 273 Gene3D - 1 74 IPR012677 -
Gma16g00354 273 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 272 - -
Gma16g00354 273 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 272 - -
Gma16g00354 273 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Gma16g00354 273 SUPERFAMILY RNA-binding domain, RBD 2 84 IPR035979 GO:0003676
Gma16g00354 273 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 69 IPR000504 GO:0003723
Gma16g00354 273 SMART rrm1_1 5 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00354 Gma-Chr16 3685190 3688565 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00354 - - gmx:100812446 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01107 19 39250189 39254698 Gma16g00354 16 3685190 3688565 GST