LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma16g00350	ATGGAGAAGCAAACCTTGGAGAAATCGCGCCGGGAACGAAGGAAAGAATCCCGCTTGGCAAAGAATGCATCAAAACATCACTCCTGGCTCCTCCACCAGAAATCTCGAGCTTTGAAAAAACATGGCAACAATTCAGATTCAGAGTTAGAAACTAAAAGCAAATCCGACACATCAGTTAGTCCTAGTGTCAAGGAAACACAAATTGAGAAGTTGGAATCTTACTCTAGGAAACATGAGACAGATGAAGAATACATGTTGTCAGAGGAAGAACATGGTGGTTCTGTTGCAAAGAAAAAGAAGAAAACAAAGAAGGGTTTTTCTAACAAATGTTCCAGGAAGAGCATGGTGGAGATGATGGGCCTGCAGGATGTTTCTATAGCTGCCAAAAAGGATCTAGAACTTGAAAGGAAGCTTTCCAAGAAGCTCAAGGTGAAGGAAGGAAAATTGAGGGGACTGGATGATGGGCTGAACATAATACTCGATGGAATGTCGTCAGCTTTTGATTTCATGGGAGAAGGGGGGGTTCTTGGTACTGGTGAATTGTCCACGAAGAGATTGAAGAAGAGCTCATCGACTAAGAAGGACAAGTTTTCAAAGAAAAGAATGAAAGTGGAAGCAATGGATGATGTATCACGGCATGTAGAAACTTCTGAAGAAGACGTAGAATCGGATGATGTTCCTGATAGTGCACCTTCAAGGAAGAAAATTAAGAAAAGGAAATTGTCGGGTCAACAGCAGGAAGACAATGCGGAGGATGATGGTGTTGGCATATCCAAGCCTATGAAATCTTGTGGAATGGAAGCGGAATTGGGGGATGCTCCTGCTGAAGTTCCGGAAAAGAAAGCCAAAGAAAAATATATAGCGCCTCACTTGAGAGCTCGTGCAGGCAATGAACCTGAAGAGCATACTCAAATTCGAAGACGTGTGCGTGGCCTTCTTAATAGACTTTCTGAATCTAATGTTGAGTCAATTACTGGGGAATTGTCCTTGATCTTTCAGTCTGTTGCTCGTAGTGTTGCTACACAGATCTTGACTGAGGAAGTTTTGGCATCATGTTCTAGTGGTCCTCGTGGAAATCAACAGTATGCTGCTGTTTTTGCTGCATTTGTTGCTGGGATGGCATGCTTGGTCGGTGTTGACTTCAGTGCAAAGTTTATGGCTTCCTTTGCAAAATGCTTTGAGGATGAGTACAATAAAGAAGACAATCTCTCCTTGCGGAATCTTACTCTTCTCTTATCCTATTTATGCATATTTGGAGTCTGTTCTAGTGATTTAATATATGACTTTTTGGTCATGCTGAGCAAGCGTTTAACTGAGGCAGATGTATCTATCATTTTGGCATTGTTACAATGTTGTGGGATGAAAATAAGGGCTGATGATCCAGCTGCCATGAAAGATTTCATTCTTAGTATTCAGAATACATCAAATAAGTTGAAGGCTTCCTCTGGAGATGACAATGAAAAGCAAAATAGTAAAAGAATGGAGTTCATGCTTGAAATCGTATGTGACATCAAGAATAACAAAAGAAAGCCAAATGAGGACTCTGCACATCACACTCGGATTAAGAAGTGGTTACAAAAGTTGAGAGTTGATGACATTTTGATTAGAGGGTTTAAATGGAGCAAGTTACTTGATCCTGACAAGAAGGGCCAATGGTGGTTGTCTGGGGATGTGGCTTCTTCAACAGGTAATGTTGAAGAAGTTGCCAACAGAATAGACAAGGATGTTCATGAAACCCAAAGAATGCTTCAGCTCGCCGCTGCTCAAAAGATGAACACAGATGCCCGAAGGGCAATCTTTTGTATAATAATGAGTGGGGAGGACTATCTTGATGCATTTGAGAAGCTTCTAAGATTGGAGTTACCAGGCAAGCAGGACAGAGATATCATGCGGGTTCTTGTGGAGTGTTGCTTGCAAGAGAAAGTTTTTAACAAGTATTATACAGTGCTGGCTTCCAAGTTATGCGAGCATGACAAAAATCACAAGTTTACTCTACAGTTTTGCCTGTGGGACCAGTTTAAGGACCTGGAGTCAATGCCGCTAATGAGGTCAATGCACCTTGCAAAATTTGTGGCTGAAATGGTTTCCTCTTTCACTCTCTCCCTTTCTGTTTTGAAGACTGTGGATCTGAATGATATCACCCTATTGACACCAAAAAGGATCATGCATTTCCGCATTCTGTTTGAGTCCATTTTAGAGTATCCTGAAAACCTGGTATGGAATATCTTCACACGTGCAGCAGTGACCCCTGAACTTGAAAGTTTTAGGCAAGGCCTTGAGTTTTTCATAAAGGAGTATATTGTGAAAAACAATAAAGATCTAAGTCAAAAGTTTAAGTTAGCAAAAAGGGCCCTTAATAATGTGGAAGGAATTTTGATGTGA	2382	0.4114	MEKQTLEKSRRERRKESRLAKNASKHHSWLLHQKSRALKKHGNNSDSELETKSKSDTSVSPSVKETQIEKLESYSRKHETDEEYMLSEEEHGGSVAKKKKKTKKGFSNKCSRKSMVEMMGLQDVSIAAKKDLELERKLSKKLKVKEGKLRGLDDGLNIILDGMSSAFDFMGEGGVLGTGELSTKRLKKSSSTKKDKFSKKRMKVEAMDDVSRHVETSEEDVESDDVPDSAPSRKKIKKRKLSGQQQEDNAEDDGVGISKPMKSCGMEAELGDAPAEVPEKKAKEKYIAPHLRARAGNEPEEHTQIRRRVRGLLNRLSESNVESITGELSLIFQSVARSVATQILTEEVLASCSSGPRGNQQYAAVFAAFVAGMACLVGVDFSAKFMASFAKCFEDEYNKEDNLSLRNLTLLLSYLCIFGVCSSDLIYDFLVMLSKRLTEADVSIILALLQCCGMKIRADDPAAMKDFILSIQNTSNKLKASSGDDNEKQNSKRMEFMLEIVCDIKNNKRKPNEDSAHHTRIKKWLQKLRVDDILIRGFKWSKLLDPDKKGQWWLSGDVASSTGNVEEVANRIDKDVHETQRMLQLAAAQKMNTDARRAIFCIIMSGEDYLDAFEKLLRLELPGKQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDQFKDLESMPLMRSMHLAKFVAEMVSSFTLSLSVLKTVDLNDITLLTPKRIMHFRILFESILEYPENLVWNIFTRAAVTPELESFRQGLEFFIKEYIVKNNKDLSQKFKLAKRALNNVEGILM	793

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma16g00350	793	PANTHER	CELL CYCLE CONTROL PROTEIN CWF22-RELATED	1	790	-	-
	Gma16g00350	793	ProSiteProfiles	MI domain profile.	594	710	IPR003891	-
	Gma16g00350	793	Pfam	MIF4G domain	307	508	IPR003890	GO:0003723\|GO:0005515
	Gma16g00350	793	SUPERFAMILY	ARM repeat	299	510	IPR016024	-
	Gma16g00350	793	SMART	if4_15	306	508	IPR003890	GO:0003723\|GO:0005515
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	1	107	-	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	198	219	-	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	1	23	-	-
	Gma16g00350	793	PANTHER	NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1	1	790	-	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	69	96	-	-
	Gma16g00350	793	SMART	ma3_7	595	701	IPR003891	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	39	53	-	-
	Gma16g00350	793	Pfam	MA3 domain	596	697	IPR003891	-
	Gma16g00350	793	Gene3D	-	274	551	-	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	241	255	-	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	182	258	-	-
	Gma16g00350	793	MobiDBLite	consensus disorder prediction	54	68	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma16g00350	Gma-Chr16	3658073	3665767	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma16g00350	K17583		-	gmx:100778579	1443.71

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma19g01111	19	39287517	39297148	Gma16g00350	16	3658073	3665767	GST