Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00335 ATGGAGATAGTGAACGGGTCACACAATTTTGAGATAAAGGGCTACTCTCTGACAAAGGGAATGGGCGTTGGGAAATACATCAGAAGTGAGACATTCACCGTAGGAGGGTACCAGTGGGCCATATACTTCTACCCTGACGGAAAATACCCAGAATATAAATTCACTTATGTCTCCATTTTCATCGCACTCCTTTCCAAGGGCACCAATGTCCGCGCTCTATTTGACCTCATGTTGCTCGACCAGAGTGGCCAAGGGAACCACAAGGTTCACTTTAGTCCCTCCCTCCACAATGCTCCTTACACTCTCAAAAGTTGTGGCAGCATGTGGGGGTATAAACGATTTTATAGACGGAGAAAACTTGAGGCGTCAACTTTCCTCAAGGATGATTGCTTGAAGATTAACTGCACTGTCGGTGTTCTGGTGTCGTCCATTGATTCTACTAAGTTAAACCCAATCCAAGTTCCTGAGTCTGATTTGGGGGCAGATTTTGCAATCTTATTAGAGAATGAGCAATTTTCTGATGTGACTTTCACGGTCAGTGGAGAAAGGTTTCATGCAAATAAACTTGTTTTGGTTGCTCGGTCAACAGTGTTCCAAACTGAATTTTTCAAAGGGATGGAGAAGGATGACCGTGGTGACATAGTTGTTAATGATATGGAACCCAAGGTTTTCAAGGCTTTGCTTCATTATATTTATAGGGACACTCTTATAGAAGATGAAGAGCTCTTTATGCTGCATTCGTCATTATTGCCTTCGCTGTCTGAATCATTTCCAGCCAAGTTGTTAGCTGCTGCAGAGAAGTATGAGTTACCAAGACTTAAGCTGATGTGCGAATCTGTACTTTGCAAAGACATATCGATAGATTCTGTTGCCTATATTCTCCCTCTGGCTGATCGTTATCGTGCTACTGAATTGAAGTCCATCTGTCTGAAATTCTCTGCTCAAAACCTTCGTGCCGTGATGCAATCTGATGGTTTGAAGTATCTTAGGCAAAATTATCCATTGTTGCAATTTGAACTTGTAAGGACTGTGGTAGGATGCAAGGAGGAATTTAGAGGAAAACGAAAATATGAAACTGTGAGGTCCCAATCTTCTAATGGTGATGACACCAATTATAGGAGTGTAAGACAACAAACCCAGGAAAATGGAGACCAGGGAAGTCAAAGCTTAAAGGTTACTTATTCTGATGGTGTTAAACAACAATAA 1206 0.4187 MEIVNGSHNFEIKGYSLTKGMGVGKYIRSETFTVGGYQWAIYFYPDGKYPEYKFTYVSIFIALLSKGTNVRALFDLMLLDQSGQGNHKVHFSPSLHNAPYTLKSCGSMWGYKRFYRRRKLEASTFLKDDCLKINCTVGVLVSSIDSTKLNPIQVPESDLGADFAILLENEQFSDVTFTVSGERFHANKLVLVARSTVFQTEFFKGMEKDDRGDIVVNDMEPKVFKALLHYIYRDTLIEDEELFMLHSSLLPSLSESFPAKLLAAAEKYELPRLKLMCESVLCKDISIDSVAYILPLADRYRATELKSICLKFSAQNLRAVMQSDGLKYLRQNYPLLQFELVRTVVGCKEEFRGKRKYETVRSQSSNGDDTNYRSVRQQTQENGDQGSQSLKVTYSDGVKQQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00335 401 ProSiteProfiles BTB domain profile. 173 240 IPR000210 GO:0005515
Gma16g00335 401 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 4-LIKE 2 357 - -
Gma16g00335 401 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 2 357 IPR045005 GO:0016567
Gma16g00335 401 SMART math_3 10 120 IPR002083 GO:0005515
Gma16g00335 401 MobiDBLite consensus disorder prediction 358 401 - -
Gma16g00335 401 SUPERFAMILY TRAF domain-like 3 140 - -
Gma16g00335 401 ProSiteProfiles MATH/TRAF domain profile. 5 137 IPR002083 GO:0005515
Gma16g00335 401 Gene3D Potassium Channel Kv1.1; Chain A 149 279 IPR011333 -
Gma16g00335 401 MobiDBLite consensus disorder prediction 363 401 - -
Gma16g00335 401 Gene3D - 284 358 - -
Gma16g00335 401 CDD MATH 6 137 IPR002083 GO:0005515
Gma16g00335 401 SUPERFAMILY POZ domain 153 283 IPR011333 -
Gma16g00335 401 Pfam BTB/POZ domain 166 283 IPR000210 GO:0005515
Gma16g00335 401 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 4 140 IPR008974 GO:0005515
Gma16g00335 401 SMART BTB_4 173 285 IPR000210 GO:0005515
Gma16g00335 401 CDD BTB_POZ_BPM_plant 159 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00335 Gma-Chr16 3517508 3527698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00335 K10523 - gmx:100775905 711.835