Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00322 ATGGGGCTCAAAATCTTCATGGCCTCCTTCTTGGTGACCTCAATCTTGTTCTTTCTCCTCTTCATCCCCACAAGATTGACCATGCAATTCTCCACCCTGAGGCCACCTGTGAACTACTTCAGTGTACCCCCCAATAGCAGCAGGGCCTATCCAGTTAGTTTTGCATACCTAATCTCTGCTTCAAAAGGAGATGTTGTGAAGCTCAAGAGGCTGATGAGGGTGCTGTATCATCCAGGGAACTACTATCTGATCCATGTGGATTATGGTGCTCCACAGGCTGAACATAAGGCTGTGGCAGAATTTGTAGCTAGTGATCCTGTTTTTGGTCAAGTTGGGAATGTTTGGGTTGTGGGGAAGCCTAATTTGGTCACATATAGAGGACCAACCATGCTTGCTACCACTCTCCATGCTATGGCTATGCTTCTCAGGACTTGCCAATGGGATTGGTTTATTAATCTTAGTGCTTCTGATTATCCCTTGGTTACACAAGATGATCTAACCCAGGCGTTTTCTGGGTTGCCAAGGAGTACCAATTTCATACAGCATAGCAGTCAATTGGGTTGGAAATTCAATAAGAGAGGGAAGCCAATAATCATAGATCCGGGGCTTTATAGCCTTAATAAATCAGAAATTTGGTGGGTTATTAAGCAAAGGAGTCTTCCAACATCTTTTAAGCTCTACACAGGTTCAGCTTGGACAATACTATCAAGATCTTTTGCAGAATATTGCATAGTGGGGTGGGAAAATTTGCCAAGGACCCTCCTCCTCTACTACACCAACTTTGTGTCATCCCCAGAAGGATATTTCCAAACAGTTATATGCAACTCTGAAGACTACAAGAACACAACTGTTAACCATGATCTTCACTACATTACTTGGGACAACCCTCCAAAACAACACCCTAGGTCTCTAGGGCTTAAGGATTATAGGAGAATGGTTCTTACTAGCCGCCCGTTTGCCAGAAAATTCAAGAGAAATGATCCAGTTCTTGATAAAATTGATAGAGAACTTCTGAAGAGGTATCATGGGAAATTTTCCTATGGAGGATGGTGCTCTCAGGGTGGAAAACACAAAGCATGCTCAGGTTTGCGAACTGAGAATTATGGTGTGCTTAAGCCTGGTCCATCCTCAAGAAGACTGAAAAATCTGCTAACAAAACTTCTCTCTGATAAATTTTTTCGCAAACAACAGTGCAGGTGCGCGCGGCGCCCTtccctccctccctccctccctccctcAGCCACTCTCTCGGCGTCTAACTTTTCATCCCTTCTTTCTCGAGTCCCTTCTCTGTTGTTGCCTTTCTTTCACGTTTTTCGTTTCGCCTGCGTTCCAATCTCAGATACCACTGCCGCCGCCACCGTAAACCACCGCCGCCGCCAGATTGGGACTCATGCCAATGCTTCTGCTTCTGATCTAAAGTCACAAGATTCATGTGGTTTAGCCTCTGTTGTAGTCTGTGAAGATAAAGGTGATAACTGA 1482 0.4372 MGLKIFMASFLVTSILFFLLFIPTRLTMQFSTLRPPVNYFSVPPNSSRAYPVSFAYLISASKGDVVKLKRLMRVLYHPGNYYLIHVDYGAPQAEHKAVAEFVASDPVFGQVGNVWVVGKPNLVTYRGPTMLATTLHAMAMLLRTCQWDWFINLSASDYPLVTQDDLTQAFSGLPRSTNFIQHSSQLGWKFNKRGKPIIIDPGLYSLNKSEIWWVIKQRSLPTSFKLYTGSAWTILSRSFAEYCIVGWENLPRTLLLYYTNFVSSPEGYFQTVICNSEDYKNTTVNHDLHYITWDNPPKQHPRSLGLKDYRRMVLTSRPFARKFKRNDPVLDKIDRELLKRYHGKFSYGGWCSQGGKHKACSGLRTENYGVLKPGPSSRRLKNLLTKLLSDKFFRKQQCRCARRPSLPPSLPPSATLSASNFSSLLSRVPSLLLPFFHVFRFACVPISDTTAAATVNHRRRQIGTHANASASDLKSQDSCGLASVVVCEDKGDN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00322 493 Pfam Core-2/I-Branching enzyme 54 312 IPR003406 GO:0016020|GO:0016757
Gma16g00322 493 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 2 398 - -
Gma16g00322 493 PANTHER GLYCOSYLTRANSFERASE 2 398 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00322 Gma-Chr16 3387191 3399389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00322 37 399 Glycosyltransferase AT4G27480 57.143 2.61e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00322 - - gmx:100818137 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma19g01136 19 39763993 39768906 Gma16g00322 16 3387191 3399389 GST