Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00300 ATGTCCACCATGAAGAACAATTTCAAAGACCAAGACCATCTCTACTCTTCATGGAGCTTCTCAAAGCTAATGGCTTTCTTCTTCCTCTTAATCTCCATCTCCTACCTCTTCTACTCCCTAAGATTCGTTAGCCACTCTTATGATTGTGATCAAACCCCTCACAATCCCACCATCACTCATCATATTTCTTTCAACACCCCATCTGAAGAAGAGTCCACACCCCGCTTTGAAGAACTCACCAACATTTCCCACATAGTCTTTGGCATAGGAGCCTCAGCAAAGCTTTGGAAGCAGAGAAAGGAGTACATCAAGCTATGGTGGAGGCCTAATGAGATGCGAGGGGTTGTGTGGTTAGAGCAAAAGGTGAAAACTGAAGCTCAAAATGAGGACTTCTTGCCCCCATTGAGGATCTCTAGTGACACTTCAAGGTTCAAGTATAAGAACCAAAAGGGTCATAGATCAGCTATTAGAATCTCACGCATAGTGTCTGAGACACTCAGGCTTGGGATGGAGGGTGTGAGGTGGTTTGTGATGGGGGATGATGACACGGTTTTTGTGGCAGAGAATTTGGTGAAAGTGTTGCAGAAATATGACCACAATCAGTTTTATTACATTGGGAGTTCCTCAGAGAGTCACTTGCAAAACATTTATTTTTCTTATAACATGGCTTATGGGGGTGGTGGTTTTGCAATTAGTTATCCCTTGGCTGTGGCATTGGAGAAGATGCAAGATAGGTGCATTCAGAGGTATCCAGGGTTGTATGGCTCCGATGATAGGATTCAGGCTTGTATGGCAGAATTGGGAGTTCCACTCACCAAGGAAAAAGGGTTCCATCAGTTTGACGTGTACGGCAACCTCTTTGGGCTTCTTGCGGCCCATCCAGTTACACCACTGGTATCCCTCCATCACTTGGACGTGGTAGAGCCCATATTTCCAAACATGAGCCGGGTACAGGCCCTGAAGCGTCTGAATCGGCCCATGAAGTTGGACCCGGCTGGGCTCATACAACAATCAATTTGCTATGACAAAGCCCGGACCTGGACCATATCCGTTTCATGGGGCTATGCGGTTCAAATTTTCCGGGGCATCTTCTCAGCCCGGGAAATGGAGATGCCAGCAAGGACATTCCTGAACTGGTACAAGCGGGCGGATTACACAGCGTATCCGTTCAACACGCGGCCGGTCAGCCGCCATGTTTGTCAGAAACCGTTTGTTTATTACTTGTCTAGGGCAGTGTATGATGAGGGTGCTAATGAAACTGCAAGTCAATATGTACGGGTTCAGCAAAACCCGGAATGCAATTGGAAAATGGAGGATCCAACCCAAATCAAAGTGGTGCATGTTTATAAGAAACCCGACCCGCATTTGTGGGACAAGGCTCCAAGAAGAAATTGTTGTAGGGTTCGACGTACAAAGAAGCAAGGAACTATGGTGATTGATGTGGGGGAATGCAAGGAAGATGAACTTGTTGAATTGTAG 1479 0.4645 MSTMKNNFKDQDHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQTPHNPTITHHISFNTPSEEESTPRFEELTNISHIVFGIGASAKLWKQRKEYIKLWWRPNEMRGVVWLEQKVKTEAQNEDFLPPLRISSDTSRFKYKNQKGHRSAIRISRIVSETLRLGMEGVRWFVMGDDDTVFVAENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKMQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNMSRVQALKRLNRPMKLDPAGLIQQSICYDKARTWTISVSWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRHVCQKPFVYYLSRAVYDEGANETASQYVRVQQNPECNWKMEDPTQIKVVHVYKKPDPHLWDKAPRRNCCRVRRTKKQGTMVIDVGECKEDELVEL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00300 492 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 490 - -
Gma16g00300 492 PANTHER FRINGE-RELATED 1 490 - -
Gma16g00300 492 Gene3D - 73 325 - -
Gma16g00300 492 Pfam Protein of unknown function, DUF604 214 466 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00300 Gma-Chr16 3181334 3186133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00300 21 486 Glycosyltransferase AT5G41460 66.053 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00300 - - gmx:100790149 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00617 07 6345773 6350838 Gma16g00300 16 3181334 3186133 GST
Gma09g02347 09 48847318 48851275 Gma16g00300 16 3181334 3186133 PCT
Gma16g00300 16 3181334 3186133 Gma09g02347 09 48847318 48851275 PCT