Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00283 ATGTCGCAGTTGCTGGATAAAGCCAAGAACTTCGTGTCGGAGAAGGTAAATGATATGGCCAAGCCGGAGGCGAGTGTCACTGACGTGGACTTCAAGCGCGTGAGCAAAGATAATGTCGAGTACTTGGCCAAGGTCTCTGTTCGTAACCCTTATTCAACTTCCATACCCATTTGTGAGATCAACTACTCTTTCAAAAGCGCATCCAGGGAGATAGCATCAGGGAAAATTCCAGACCCAGGATCGTTGAAGGCAAAGGACACAACAATGGTGGATGTGCCAGTTAAGGTTCCATACAGCATATTGATGAGCTTGGCAAAGGACATTGGTGCTGACTGGGACATAGACTATCAATTGGATCTTGGTCTGGTTATTGATGTTCCTGTCATTGGCATCTTCACCATTCCTCTCTCTCAGAAAGGAGAGATCAAGCTACCAACCCTCTCTACCATGTTCGCCTAA 459 0.4662 MSQLLDKAKNFVSEKVNDMAKPEASVTDVDFKRVSKDNVEYLAKVSVRNPYSTSIPICEINYSFKSASREIASGKIPDPGSLKAKDTTMVDVPVKVPYSILMSLAKDIGADWDIDYQLDLGLVIDVPVIGIFTIPLSQKGEIKLPTLSTMFA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00283 152 PANTHER - 1 152 IPR045043 -
Gma16g00283 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
Gma16g00283 152 Gene3D - 17 151 - -
Gma16g00283 152 SUPERFAMILY LEA14-like 1 150 - -
Gma16g00283 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Gma16g00283 152 SMART why 24 141 IPR013990 GO:0009269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00283 Gma-Chr16 2969200 2970202 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00283 - - gmx:547533 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00283 16 2969200 2970202 Gma16g00283 16 2969200 2970202 ECH
Gma18g02201 18 55794234 55796173 Gma16g00283 16 2969200 2970202 PCT
Gma09g02328 09 48665033 48666975 Gma16g00283 16 2969200 2970202 PCT
Gma16g00283 16 2969200 2970202 Gma18g02201 18 55794234 55796173 PCT
Gma16g00283 16 2969200 2970202 Gma09g02328 09 48665033 48666975 PCT