Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00279 ATGCTAGAGACGGAGCAAGCAAGACCATTAGCCCCATCAATAGAGCGCCAAAGCAGCGATGAGGATAACACCACTCCACACCCTCAAACACAAGGCCACAAAAAACTCATCAAACGTTGTGCTTGCCCATTAATCTCTTTACTTCTCATAGCAATAGTGATCATAGTTTTAATCTTCACAGTATTTCGTGTCAAGGACCCCGTGATCACAATGAACAGCATCAAGATCACAAAGCTCCAACTTGTCAACACCATGTCACAACAACCCGGGGCCAACATGTCCTTAGTCGCTGACGTGTCGGTGAAGAACCCTAACGTTGCATCCTTTAGGTATAGCAACACCACCACGAGTTTGTACTACCATGGTGTCATTGTGGGGGAGGCTAGAGGACCACCTGGGAGGGCCAAGGCCAGAAGAACATTGAGGATGAATGTCACAATTGATGTCATCACCGCTCGCGTCATTTCTAGCCCGGATTTTGTGACGGATTTAGGTTCCGGGTTGTTGACTATGAGCAGCTTCTCTAGAGTTCCTGGGCAGGTCAAGATCTTGAACTTGATTAAGAGACATGTTGTTGTGAAAATGAATTGCACCACCACTTTTAATATTTCCACACAGGCGATTAAGGAGCAAAGTTGTAAGCGGAAGGTTAAACTTTAG 660 0.4591 MLETEQARPLAPSIERQSSDEDNTTPHPQTQGHKKLIKRCACPLISLLLIAIVIIVLIFTVFRVKDPVITMNSIKITKLQLVNTMSQQPGANMSLVADVSVKNPNVASFRYSNTTTSLYYHGVIVGEARGPPGRAKARRTLRMNVTIDVITARVISSPDFVTDLGSGLLTMSSFSRVPGQVKILNLIKRHVVVKMNCTTTFNISTQAIKEQSCKRKVKL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00279 219 Pfam Late embryogenesis abundant protein 99 198 IPR004864 -
Gma16g00279 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 20 218 - -
Gma16g00279 219 SUPERFAMILY LEA14-like 49 154 - -
Gma16g00279 219 MobiDBLite consensus disorder prediction 11 31 - -
Gma16g00279 219 MobiDBLite consensus disorder prediction 1 33 - -
Gma16g00279 219 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 20 218 - -
Gma16g00279 219 Gene3D - 52 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00279 Gma-Chr16 2954730 2955629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00279 - - gmx:100799820 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00279 16 2954730 2955629 Gma16g00279 16 2954730 2955629 ECH