Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00263 ATGGGTACCCTTAAGGTGTCCAACAGTAGTTTATACATATTTTCGAAGTTCCTAGTAATTTGTATGGTGATGATGATATCTTTGGTTGATTCAAGTTATTCCTTGTGTGATTTTGAGGCAATCTTCAATTTTGGTGATTCGAATTCAGATACGGGTGGGTTTCATACAAGCTTTCCTGCACAGCCTGCTCCCTATGGAATGACTTACTTCAAAAAACCAGTGGGGCGTGCTTCTGATGGAAGGCTTATTGTTGATTTTCTCGCTCAGGGTCTTGGATTGCCATATTTGAGCCCATATCTGCAATCAATTGGATCAGACTATACTCATGGGGCTAACTTTGCGTCTTCAGCCTCCACTGTGATTCCGCCCACAACTTCCTTCTCTGTCAGTGGGCTAAGTCCATTTTCCCTCTCTGTTCAACTCAGGCAAATGGAGCAATTCAAAGCCAAAGTTGATGAATTTCATCAAACAGGTACACAGAAAATGATATCATCTGGAACGAAAATCCCTTCTCCAGATATATTTGGAAAGGCCCTTTACACGTTCTATATTGGGCAAAATGACTTCACTTCCAAAATAGCAGCCACTGGTAGTATTGATGGAGTGAGGGGCAGCCTTCCTCACATCGTTTCACAAATCAATGCTGCTATCAAGGAGCTATATGCACAAGGGGGGCGTGCATTTATGGTATTCAATCTTGGTCCTGTGGGATGCTATCCTGGATACTTGGTGGAGCTTCCTCATGCTACTTCCGACTATGATGAGTTTGGATGCATTGTTTCTCACAACAATGCTGTAAATGATTATAACAAACTGTTGAGGGATACATTGACTCAAACCGGAGAAAGTTTAGTAGATGCTTCCCTTATTTATGCGGACACACACTCTGCTCTCTTGGAGCTCTTTCACCACCCCACATTCTATGGACTAAAGTATAATACCAGAACATGTTGTGGGTATGGAGGCGGTGTCTACAACTTTAACCCTAAAATTTTGTGCGGCCATATGCTAGCAAGTGCTTGTGATGAACCCCAGAACTATGTGAGCTGGGATGGCATCCATTTCACAGAAGCAGCAAACAAGATTGTTGCACATGCCATTCTAAATGGTTCTCTTTTTTATCCTCCTTTCCCTCTTCATAAACACTGTGATCTCCAACCTATTGGTTGA 1170 0.4248 MGTLKVSNSSLYIFSKFLVICMVMMISLVDSSYSLCDFEAIFNFGDSNSDTGGFHTSFPAQPAPYGMTYFKKPVGRASDGRLIVDFLAQGLGLPYLSPYLQSIGSDYTHGANFASSASTVIPPTTSFSVSGLSPFSLSVQLRQMEQFKAKVDEFHQTGTQKMISSGTKIPSPDIFGKALYTFYIGQNDFTSKIAATGSIDGVRGSLPHIVSQINAAIKELYAQGGRAFMVFNLGPVGCYPGYLVELPHATSDYDEFGCIVSHNNAVNDYNKLLRDTLTQTGESLVDASLIYADTHSALLELFHHPTFYGLKYNTRTCCGYGGGVYNFNPKILCGHMLASACDEPQNYVSWDGIHFTEAANKIVAHAILNGSLFYPPFPLHKHCDLQPIG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00263 389 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 387 - -
Gma16g00263 389 CDD SGNH_plant_lipase_like 40 371 IPR035669 -
Gma16g00263 389 Gene3D SGNH hydrolase 30 371 IPR036514 -
Gma16g00263 389 Pfam GDSL-like Lipase/Acylhydrolase 41 367 IPR001087 GO:0016788
Gma16g00263 389 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 6 387 - -
Gma16g00263 389 SUPERFAMILY SGNH hydrolase 41 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00263 Gma-Chr16 2804064 2806815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00263 40 370 Acyl Lipid Metabolism Gene Families AT4G10950 27.907 2.43e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00263 - - gmx:100814956 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00263 16 2804064 2806815 Gma16g00263 16 2804064 2806815 ECH
Gma07g00564 07 5446820 5449181 Gma16g00263 16 2804064 2806815 GST