Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00233 ATGAATGGTGGTGAATCTTATGGTGCTATTGAGACACAGTACATAAGAAGGCATCACAAACATGAACCAAGGGAAAACCAGTGCACCTCTGCACTTGTTAAACACATAAGAGCTCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCTCAGAAATATAAACCATTTGTTAGCAGGTGTATCATGCAAGGGGACCTAGGCATTGGAAGCGTTAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCCACAACAAGTACTGAGAGGTTGGAACAACTGGATGATGAGGAGCACATTCTTGGAATAAGGATAGTTGGAGGTGACCACAGGCTGAGGAACTATTCTTCCATAATCACCGTCCATCCGGAGGTCATTGATGGGAGACCCAGTACAATGGTGATTGAATCATTTGTGGTGGATGTGCCTGATGGGAACACCAGGGATGAAACTTGTTACTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTTTAGCTGATGtctcagagagaatctcagagagaatGGCCGTGCAAGGTCGAACCGATCCTATCAACCATTAA 570 0.4298 MNGGESYGAIETQYIRRHHKHEPRENQCTSALVKHIRAPVHLVWSLVRRFDQPQKYKPFVSRCIMQGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGRPSTMVIESFVVDVPDGNTRDETCYFVEALIRCNLSSLADVSERISERMAVQGRTDPINH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00233 189 CDD PYR_PYL_RCAR_like 28 172 - -
Gma16g00233 189 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Gma16g00233 189 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 6 185 - -
Gma16g00233 189 Gene3D - 5 183 IPR023393 -
Gma16g00233 189 PANTHER - 6 185 - -
Gma16g00233 189 SUPERFAMILY Bet v1-like 28 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00233 Gma-Chr16 2536544 2539450 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00233 K14496 - gmx:100500065 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00233 16 2536544 2539450 Gma16g00233 16 2536544 2539450 ECH
Gma07g00532 07 5139334 5143399 Gma16g00233 16 2536544 2539450 GST