Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00232 ATGGGAGAACATGAGGGGTGGGCACAGGCACCAAGTGGGCTATTGCCAAATGGCTTGTTGCCCAATGAAGCTGCCTCTGTGATACAGGTTCTCGACTCAGAGCGGTGGTTGAAAGCTGAGCAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCTCCCTCTGAGGAGCGCCGCAATGCGGTTGCCGACTATGTCCAACGGCTGATCATGAAATGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCGGTACCCCTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACTGCATTCAGTAAGAATCAAAATCTGAAGGATTCATGGGCACATCAAGTTCGTGACATGCTAGAGAATGAGGAGAAGAATGAGAATGCCGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCTGAAGTGAAAATTATAAAGTGTCTTGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGCATTATCCTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCCTTAGAAACCTTGGTTCTTTACATTTTTCATGTTTTCAACAATTCTTTTGCCGGACCGCTAGAGGTATTGTATCGATTTTTGGAGTTTTTTAGTAAGTTTGACTGGGAAAATTTCTGTGTAAGTCTTTGGGGTCCAGTACCTATTAGTTCACTCCCAGATGTGACAGCTGAACCTCCTAGAAAAGATGGTGGAGATTTACTGCTCAGCAAGTTATTTCTCGATGCCTGTAGCTCAGTTTATGCCGTTTTCCCCGGTGGCCAAGAAAATCAGGGGCAACCCTTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGCCGTAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCGTTTGGGGCAAAAAGGCTGGCTAGATTACTTGATTGCTCAGAGGATGAATTGTTTTCTGAGGTCAATCAGTTCTTTTTTAACACTTGGGAGAGACACGGAAGTGGGGAAAGGCCTGATGTTCCAAGCATCGACCTACGGCATTTGAGTTTATCCAGTCATGACCAATTACAGAGGTTTGAGAATCTCCGGAACAATAACCATAAAATTGGTAGTGCCTCCAATCATGAATCTAATGAAGAGGAAGATGTTTCACAAAGTGGTCTGTCTCAGTATAGTAATTTATCATCGGAAAAGACAACTAGAAATGTTGTTTCTACAGTTTCGCATTCTCAGAATCAAAAGAGTTATGGAAGCCAAAATAATTCAAGGACCTTTGATCAAGTCCGTAGGGAAACTAATTCTAATCCAGGTCCTCATGTCGATAAAGTTCAGAGAAATGTTAAAGCCGATAACCTAGTGAGTGATGTTCAGGGAAGGTTTCTATTTGCCAGGACATGTTCTAGCCCTGAGCTGACTGACTCATATGGTGACGTTTCAACCCAAGGAAGGCGTACAAAAGCAACAGAAAGTAGTAAAGGCCAGACTTCCTTTGCAAAGTTGGAGAATAGTCGTAGGAAGCATGTTGAACCTGATGTAGCTGTAAGAATGGATGAGTCATCTGCTAGGCTCATCTCATCTCATCAAGTTCTTGAAAATGCTGCTGATTCAAACAGTAATCATGATGAATCAAGGTCAGGTGTCATGGGTGAAGAGTTTGCTTCTGTTGTGGGTGCAGATGGAATGCAGATGATGCATCAGGAGGAGCAGGACCTTTTGAATATGATGGCATCTCCCACAGCTCAGGGTTTCAGTGGTCAGACTCATGTTCCAATGAATATTGCGCCAGGTCACCTACCATTTCACTTTCCACCTTCCATTCTTGCATCGATGGGATATGCTCAGAGAAATATGGGTAACATTCCCTTTATTGAGGCTCCTTGGGGTACAAATATGCAATTTCCTCAAGGTTTCGTCCCACCATTGACTCCATATTTCCCTGGCATAGGAATGACCTCAAGTCCTCAAGATTTACTTGAAACTAACCATGAAAATTTCAGTTCTGTTGAGATGAACATAGCAGAAGCAGATAATAATTACTGGCATGAACAGGAAAGGGGTTCTGCTAGTGAGGTTGAAGTTGATAATGGAAATTTTGAAATGCTTCCAGAGGATAGACAACAGTCTACTTCAGATAGTTATAATAACTCTGCCCCATTGTCTCGGGTAGGAAGCTCCAACAGTAACAGTTCTGCCAGAGTTCAGCAGAAGTTTACTAAAGAAAACCGAGGTTCTACAAGAGAAGAGCATGTTGACAATTTTCATTATCAAGATGGCCGAAGAAATGAGGTTTATTTTGATGATAGAACAGCAAATTCTGAGTTGTCCAGTGCACCTCCTTTGAGCTCCTTTAAGAGTAGGACCTCTTCTGAAAGCTCATGGGATGGATCATCAGCCAAATCCTCAAAATCAACTAGGGAGAGAAGGGGGAGGAAAAATACTTCCTCAATAGCATCTCCTGTTTATGCGAAGGGTAAGAATGTTTCAGAAACTTCATCTAATCGAGTAGATGATGAAAATAGAGAGTGGACTCCTTTGTCGACCATGGCATCTAACATATCAGAAAGAAGCATTTGGCCCACATCTAGTACTTCTATGCATGTTCCAAGGAATCAAATATCTGGTTTTGAAACTGCCCAGACAAGTGGATCAGATTCTCCATTACCCATATCTCCGGTGCTTTTAGGTCCTGGTTCTCGCCAAAGAGATAATTCTGGGGTTGTTCCATTTACATTTTATCCTACTGGGCCACCTGTTCCCTTTGTTACAATGCTTCCTTTATATAATTTTCCAACTGAGTCTTCTGACACTTCAACAAGCAACTTCAATTTGGAAGAAGGGGCAGATAACAGTGATTCAAGTCAGAATTTTGATTCATCTGAGGGATATGAACACCCTGGGGTGTCAAGTCCTTCCAATTCTATGACAAGGGTGGCTATTGAGTCATCAGAGCACAAGTCTGACATTCTTAATAGTGACTTTGTTAGCCACTGGCAAAATTTGCAATATGGCCGATTTTGTCAAAACTCACGTCTTCCGCCTTCAATGACGTATCCTTCACCTGGTATGGTGCCTCCTGTTTATTTGCAGGGTCGATATCCTTGGGATGGCCCTGGAAGACCTATTTCTGGTAACATGAATATTTTCAGTCAGCTTATGAACTACGGGCCACGCCTGGTTCCTGTTGCTCCTCTCCAATCGGTTTCTAATAGACCTGCCAATATTTACCAACGTTATGTAGATGATATGCCTCGATATCGAAGTGGGACTGGAACCTACTTGCCAAATCCGAAGGTTTCTGCTCGGGATCGGCATTCCACTAATACCAGAAGGGGAAATTACAATTATGATAGAAGCGACCATCATGGTGATAGAGAAGGAAATTGGAATACAAACTCAAAATTGCGAGGAACTGGGCGTGGCCATAATCGCAACCAAAATGAGAAGCCCAACTCAAAGACAGAGCGGCTGTCTAGCAGCGAGAGCCGTGCCGAGAGATCATGGGGTTCACATAGGCATGACAATTTCATTCCTCACCAGAATGGTCCAGTTGGTTCAAATTCCTTGCAGAGTAATCCTTCCAATGTAGCTTATGGAATGTACCCTATACCGGCCATGAACCCAAGCGGGTTCTCGTCAAATGGACCAACAATGCCATCTGTTGTAATGTTTTATCCTTATGATCATAATACTGGTTATGGTTCACCAGCAGAGCAGCTTGAGTTTGGGACTTTGGGACCAATGGGGTTCTCAGGTGTCAATGAGCTGTCACAGGCAAATGAGGGAACTCAATCTAGTGGAGCACATGAAGATCAAAGGTTTCGTGGTGGTCACAGCCAACGATCTTCCCCAGATCAACCCTCCTCACCTCATGTCTCAAGGGGTCCCTGA 4008 0.4326 MGEHEGWAQAPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDSWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWENFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCSEDELFSEVNQFFFNTWERHGSGERPDVPSIDLRHLSLSSHDQLQRFENLRNNNHKIGSASNHESNEEEDVSQSGLSQYSNLSSEKTTRNVVSTVSHSQNQKSYGSQNNSRTFDQVRRETNSNPGPHVDKVQRNVKADNLVSDVQGRFLFARTCSSPELTDSYGDVSTQGRRTKATESSKGQTSFAKLENSRRKHVEPDVAVRMDESSARLISSHQVLENAADSNSNHDESRSGVMGEEFASVVGADGMQMMHQEEQDLLNMMASPTAQGFSGQTHVPMNIAPGHLPFHFPPSILASMGYAQRNMGNIPFIEAPWGTNMQFPQGFVPPLTPYFPGIGMTSSPQDLLETNHENFSSVEMNIAEADNNYWHEQERGSASEVEVDNGNFEMLPEDRQQSTSDSYNNSAPLSRVGSSNSNSSARVQQKFTKENRGSTREEHVDNFHYQDGRRNEVYFDDRTANSELSSAPPLSSFKSRTSSESSWDGSSAKSSKSTRERRGRKNTSSIASPVYAKGKNVSETSSNRVDDENREWTPLSTMASNISERSIWPTSSTSMHVPRNQISGFETAQTSGSDSPLPISPVLLGPGSRQRDNSGVVPFTFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNLEEGADNSDSSQNFDSSEGYEHPGVSSPSNSMTRVAIESSEHKSDILNSDFVSHWQNLQYGRFCQNSRLPPSMTYPSPGMVPPVYLQGRYPWDGPGRPISGNMNIFSQLMNYGPRLVPVAPLQSVSNRPANIYQRYVDDMPRYRSGTGTYLPNPKVSARDRHSTNTRRGNYNYDRSDHHGDREGNWNTNSKLRGTGRGHNRNQNEKPNSKTERLSSSESRAERSWGSHRHDNFIPHQNGPVGSNSLQSNPSNVAYGMYPIPAMNPSGFSSNGPTMPSVVMFYPYDHNTGYGSPAEQLEFGTLGPMGFSGVNELSQANEGTQSSGAHEDQRFRGGHSQRSSPDQPSSPHVSRGP 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00232 1335 MobiDBLite consensus disorder prediction 1180 1212 - -
Gma16g00232 1335 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 353 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 779 795 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 812 885 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 1318 1335 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 469 488 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 742 795 - -
Gma16g00232 1335 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1333 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 812 839 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 1125 1230 - -
Gma16g00232 1335 CDD NT_PAP_TUTase 59 166 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 853 869 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 973 1019 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 406 464 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 1142 1168 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 423 464 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 511 538 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 511 548 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 1292 1335 - -
Gma16g00232 1335 PANTHER - 1 1333 - -
Gma16g00232 1335 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Gma16g00232 1335 Gene3D - 162 361 - -
Gma16g00232 1335 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 1292 1309 - -
Gma16g00232 1335 MobiDBLite consensus disorder prediction 742 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00232 Gma-Chr16 2506686 2514490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00232 - - gmx:100800527 2654.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00232 16 2506686 2514490 Gma16g00232 16 2506686 2514490 ECH
Gma07g00530 07 5103384 5110694 Gma16g00232 16 2506686 2514490 GST