Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00229 ATGAAGAACTTGCAGAGCTCGGAAGAATTACAGTCGTCGACTCAAGCTTCTCATGAGCCCAAGAGTGAACAACCAAACAATCACACAACTGATGCTCCTGTTACAGACACAGGATCAGCATCTGCTACAAGTAATGACAGCAAAAAAGTTTCACGGCAGGATATTGAATTTGTCCAGAATTTAATAGAAAGATGCCTACAGTTATATATGAATAAAGATGAAGTGGTTAAAACATTACTGACTCGGGCAAAGATAGATCCTGGATTCACAACTCTTGTATGGCAGAAGTTGGAAGAAGAGAATGCCGATTTTTTCAGGGCCTACTATATCAGACTAAAATTGAAAAAGCAAATACTATTATTCAATCATTTACTTGAGCATCAGTATCATCTGATGAAGTGTCCAATGCCTGCAAAGGTTCCATTGGCTCCAATACAGAATGGAATCCATCCAATGCCTGCCAACAACCTACCTATGGGATATCCAGTGCTACAGCAGCCTCCCATGCCAGCAACAGGTCAACCTCATATTGACTCCATGGGTTGTGGTATATCAAGTTGTCATGTAGTTAACGGAGTCCCTGCCCCAGGAAACTTTCACCCCATTCGGATGAATTCTGGGAATGATATGGTGGTGGACCACAGTGCTCCTGATATGGCTCCTGTTATTCCACCAAATGGTACAATGTCGTCTGTCTCAGAAATGCCAGTAAGTCCGACATCAGTAGCATCCAGTGGTCATTTCGCCTTCAGTGCCTCAGAAATATCAGGAATGGGCGCAGACGCATCAGCTCTTGATACAGCATTTACATCTGATGTGGTAAGTTCAGTAGGACTACAGCTTGCACCAGATGGTGGAAATGGAATTTCCAGATCGCTGGATCAAATTCAGTGGAATTTTAGCTTATCTGATCTAACGGCTGATTTGCCAAACTTGGGAGATCTAGGAGCTCTGGGAAACTATCCTGGTTCACCATTTTTGCCATCTGATTCAGACATTTTGCTAGAATCTCCTGATCAACAGGATATAGTGGATGACTTCTTTGTTAATTCTGAGCCCCCATGCTCTCAATCGGATGAGGAGAAATCTTGA 1092 0.4295 MKNLQSSEELQSSTQASHEPKSEQPNNHTTDAPVTDTGSASATSNDSKKVSRQDIEFVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKCPMPAKVPLAPIQNGIHPMPANNLPMGYPVLQQPPMPATGQPHIDSMGCGISSCHVVNGVPAPGNFHPIRMNSGNDMVVDHSAPDMAPVIPPNGTMSSVSEMPVSPTSVASSGHFAFSASEISGMGADASALDTAFTSDVVSSVGLQLAPDGGNGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPGSPFLPSDSDILLESPDQQDIVDDFFVNSEPPCSQSDEEKS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00229 363 MobiDBLite consensus disorder prediction 1 48 - -
Gma16g00229 363 PANTHER HELICASE WITH ZINC FINGER PROTEIN 1 363 - -
Gma16g00229 363 MobiDBLite consensus disorder prediction 1 49 - -
Gma16g00229 363 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Gma16g00229 363 PANTHER OS02G0137100 PROTEIN 1 363 IPR006476 -
Gma16g00229 363 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 55 111 IPR006476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00229 Gma-Chr16 2463265 2468224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00229 - - gmx:100809603 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00229 16 2463265 2468224 Gma16g00229 16 2463265 2468224 ECH
Gma07g00528 07 5071707 5078631 Gma16g00229 16 2463265 2468224 GST