Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00223 ATGTTCCTCCTCACACGCCTTACCCGCCAAAACCCCTCACGCGCCACGCTCCTCACGCGCCACCTCTCCTCAGCCGCGTCCAAACTCCACTCCAATTACACCTTCAAACCACCGTCTTCTCTCCCTCCCCAGCCCCAATGCTCCAATTTCCCTCCCTCCAAGCCCAACCAGAAAAAGCCCAAGCCCAGGTATCGGCCCCCCTCCTCCCTCGACCAGGCCGGCCGCAAGCCCGTCCGGTCCAACGACCTGCCCTTCGACTTCCGGTTCAGCTACACGGAGAGCAGTGCCAAGGTGCGACCCATCGGGCTCAGGGAGCCCAAGTACTCCCCCTTCGGACCGGGCCGGGTCGACCGCAAGTGGACCGGAGTGTGCGCCCCCGCGGTGGACCCCACGGTGGAGAGCCTGGAGGGTCCGGAGGACCCTAAGTTGGAGGAACAGAGGAAGAAGAAGAGAGAGATGATTCAAGGAAAACCGCTTTCTAGTGAAGAGAGAAAGACATTGGTTTCGCAATTTGAGAGAAGCAAAACTAATAGACATGTCAATCTCGGGAGGGATGGTCTAACTCACAACATGCTGAATGTTATTCATAATCATTGGAAATTTGCTGAAGCAGTTAGAATCAAATGCATGGGTGTTCCAACTATGGACATGAATAATATTTGTACCCAGCTTGAGGACAAAACATTTGGGAAGGTCATTTTCAGACATGGGGGTACACTTATACTATACAGAGGCAGAAATTATAATCCGAAAAAGAGGCCTGTAATTCCTGTCATGTTGTGGAAGCCCCATGAACCTGTATATCCCAGACTGATTAAGACAACAATTGATGGCTTAAGTATTAAGGAAACAAAAGAAATGCGGAAGAGAGGACTATCTGTTCCTGCTTTAACAAAACTTGCCAAAAATGGTTATTATGCTTTTTTGGTACCCATGGTCAGAGATGCTTTCCTCTCCTGCGAATTGGTTCGGATAGACTGCGAGGGACTTGAGAGGAAAGATTACAAGAAAATAGGCTGCAAACTCAGGGACATGGTCCCCTGTATTCTGGTGACTTTTGAGAATGAACAAATTGTGGTTTGGAGGGGGAAGGATTATAAGCCCCCGAAGGATGGATACTTTCTCAAAGATCGAGAATCGTTTGACAACGATGATGACTTTTGTGTGGGAAAAGAGCAACAGGCTATGTAA 1191 0.4954 MFLLTRLTRQNPSRATLLTRHLSSAASKLHSNYTFKPPSSLPPQPQCSNFPPSKPNQKKPKPRYRPPSSLDQAGRKPVRSNDLPFDFRFSYTESSAKVRPIGLREPKYSPFGPGRVDRKWTGVCAPAVDPTVESLEGPEDPKLEEQRKKKREMIQGKPLSSEERKTLVSQFERSKTNRHVNLGRDGLTHNMLNVIHNHWKFAEAVRIKCMGVPTMDMNNICTQLEDKTFGKVIFRHGGTLILYRGRNYNPKKRPVIPVMLWKPHEPVYPRLIKTTIDGLSIKETKEMRKRGLSVPALTKLAKNGYYAFLVPMVRDAFLSCELVRIDCEGLERKDYKKIGCKLRDMVPCILVTFENEQIVVWRGKDYKPPKDGYFLKDRESFDNDDDFCVGKEQQAM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00223 396 ProSiteProfiles CRM domain profile. 157 255 IPR001890 GO:0003723
Gma16g00223 396 ProSiteProfiles CRM domain profile. 277 373 IPR001890 GO:0003723
Gma16g00223 396 MobiDBLite consensus disorder prediction 131 164 - -
Gma16g00223 396 Gene3D - 158 255 IPR035920 -
Gma16g00223 396 Gene3D - 279 373 IPR035920 -
Gma16g00223 396 MobiDBLite consensus disorder prediction 135 159 - -
Gma16g00223 396 MobiDBLite consensus disorder prediction 29 81 - -
Gma16g00223 396 SUPERFAMILY YhbY-like 279 369 IPR035920 -
Gma16g00223 396 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 5 394 IPR044599 GO:0000373
Gma16g00223 396 Pfam CRS1 / YhbY (CRM) domain 159 244 IPR001890 GO:0003723
Gma16g00223 396 Pfam CRS1 / YhbY (CRM) domain 280 362 IPR001890 GO:0003723
Gma16g00223 396 SUPERFAMILY YhbY-like 158 254 IPR035920 -
Gma16g00223 396 SMART CRS1_YhbY_2 279 362 IPR001890 GO:0003723
Gma16g00223 396 SMART CRS1_YhbY_2 159 244 IPR001890 GO:0003723
Gma16g00223 396 PANTHER CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL 5 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00223 Gma-Chr16 2412524 2417263 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00223 - - gmx:100789954 783.482