Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00220 ATGGAATGGTCTTCAAACTCTGCCACAAAGGCGTACCTTGATACCCTTCAACTGTGTAACAATCACAAAAGACAATACGGCACATGGAGAATTCAAAATCCAGGAAGCAATGAATTTTTATCAGCATTAGCAGCAGGAATGAAAGCAAAACTCATAGTGGAAGTGACGTCCTGCGTATCGCTAACCACCTTAGCCCTTGCAGCTGCTGCAAGACAAACCGGAGGCAGAGTGGTGTGTATTCTACCCGAGTCAATCCTTAATGATTCACAACAAGTTATCAACAACTCAGGGCTTAAAGACCAAGTTGAATTTAGAACTGAAGACCCCTCCAAGCTACTACCCTTCTATGAGAACATTGATTTCTTTCTTGTTGATTGCAAGGATAATGAAAACTATGCAAGGTTGCTCAACTTGGTAGATGTTAACCTCACAAGATCAATAGTGGTCGCAAAGAACATGGTTGGTGGTGATGGTGACAAAAAAGGAATAAGATGGTGCCTAAGAGGAAAGGATGAGAAATTAGAAGTAAGATCTCTAAAGCATCCTTTAGGGAATGGCATGGAAGTTACTAGGATTAGCAAGAGTGATAACACTAATAATATGAGATTTGGTGTTAAAGGAGATTATAGCAAGAAAAGGAGAAAGAGCTCATGGATTGCCAAATTTGATGAGGAGAGTGGTGAGGAACATATATACAGGGTGCCTCAGAGTGATGATTACCTATTTGTACCAACCACTAAACCCCACAACAACCACCGAACTTTAATCTTCAAACGCAAGAGACTTAATCATCTCTCAAGTCTTTGCTTCCTTGCTAGATCTTGGACTCAAACATGGCCATGTTTTGTCAAGCTAGGTGTTCTGAATCTTGTCTTGGTTTTCAAAATCACAGCATTGGGGGATGTCAGTGGAAGTGTTACAGCAGAAAACACTTGCAAGAACACAAATTATCAAAGTTTTCTCCCTCCACCGTACCAGAATATGTCCCAAATGATATGCACACCTGTATGGCACACCTATGAATTGAGGTATTTCCAGAATGGTGATACAACAACTATCATATTATCTGCTCCCTACACAATAGGGTGGGTAGGAATTGGATTTTCTAGAGATGGAATGATGGTTGGTTCCAGTGCAATGGTGGGATGGATTACCAAACATGGTCATGCAAACATGAAGCAATTTTACCTAAGGGGTAGGAAGTCATCAGAAGTCAAAATAGACAAAGGTGAACTCCCCCTCAATAATATCCCTTCGGCTGTGGCGACTAATGGAGCTGAAATTCATATGGCATTTCAGTTGCAGATGACAACCCCATTTCAGAAACAACCAATTTTGTTGGCTTTTGGTAGCAAATATCCACAGAACCACCACCTCTCCAAGCATGAAGACAAAACAGCTATTGTGTTTGACTTCTCTGCAGGTTCTACGGGTCCTGTATCCCGTGAATTGATTCAGATGAGGACGAACCATGGAATTTTGGCTATAATAGGGTGGGGTCTAATCCTGCCTGTAGGGGCTATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGTTCTATCTCCATGCAATCATTCAGTTTGTAGGATTCACATTTGGGCTTGGTACAGTAATTCTTGGATTACAACTCTATTCCAAAATGCAAGTCCATATACCAGCTCACAGAGGCATAGGCATCTTTGCTCTGGTACTAAGTATTCTTCAGGTGTTGGCACTCTTCTTGAGACCAAACAAGGATTCCAAGATTCGAAAATTTTGGAATTGGTACCACAGTTGGTTTGGAAGGATGGCACTTGTATTTGCAGCCATTAACATAGTGTTGGGGATGCAAGCTGCGGGGGCAGGAAGTGATTGGAAGATAGGCTACGGATTCGTTTTTGGCATTATGGTTGTTGCGGCTATTGTTCTTGAAATATTGGCTTATTTGAAAAGATCAGAGATGCGTTCTCTACCTCCTAACTTCCAATTGGATCCTGTTGGAGGAGCTACATTTCCAAGTAAATGA 2010 0.4154 MEWSSNSATKAYLDTLQLCNNHKRQYGTWRIQNPGSNEFLSALAAGMKAKLIVEVTSCVSLTTLALAAAARQTGGRVVCILPESILNDSQQVINNSGLKDQVEFRTEDPSKLLPFYENIDFFLVDCKDNENYARLLNLVDVNLTRSIVVAKNMVGGDGDKKGIRWCLRGKDEKLEVRSLKHPLGNGMEVTRISKSDNTNNMRFGVKGDYSKKRRKSSWIAKFDEESGEEHIYRVPQSDDYLFVPTTKPHNNHRTLIFKRKRLNHLSSLCFLARSWTQTWPCFVKLGVLNLVLVFKITALGDVSGSVTAENTCKNTNYQSFLPPPYQNMSQMICTPVWHTYELRYFQNGDTTTIILSAPYTIGWVGIGFSRDGMMVGSSAMVGWITKHGHANMKQFYLRGRKSSEVKIDKGELPLNNIPSAVATNGAEIHMAFQLQMTTPFQKQPILLAFGSKYPQNHHLSKHEDKTAIVFDFSAGSTGPVSRELIQMRTNHGILAIIGWGLILPVGAIIARYFRHKDPLWFYLHAIIQFVGFTFGLGTVILGLQLYSKMQVHIPAHRGIGIFALVLSILQVLALFLRPNKDSKIRKFWNWYHSWFGRMALVFAAINIVLGMQAAGAGSDWKIGYGFVFGIMVVAAIVLEILAYLKRSEMRSLPPNFQLDPVGGATFPSK 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00220 669 Pfam Protein of unknown function (DUF1442) 3 233 IPR009902 -
Gma16g00220 669 CDD DOMON_DOH 339 467 IPR045266 -
Gma16g00220 669 ProSiteProfiles DOMON domain profile. 338 450 IPR005018 -
Gma16g00220 669 ProSiteProfiles Cytochrome b561 domain profile. 453 647 IPR006593 -
Gma16g00220 669 CDD Cyt_b561_FRRS1_like 470 640 - -
Gma16g00220 669 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 298 658 - -
Gma16g00220 669 Pfam DOMON domain 341 406 - -
Gma16g00220 669 PANTHER MEMBRANE PROTEIN-LIKE 298 658 - -
Gma16g00220 669 Gene3D - 466 651 - -
Gma16g00220 669 Gene3D Vaccinia Virus protein VP39 5 195 IPR029063 -
Gma16g00220 669 SMART DOMON_3 363 450 IPR005018 -
Gma16g00220 669 SMART 561_7 490 611 IPR006593 -
Gma16g00220 669 Pfam Eukaryotic cytochrome b561 491 612 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00220 Gma-Chr16 2371634 2378255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00220 - - gmx:100778214 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00220 16 2371634 2378255 Gma16g00220 16 2371634 2378255 ECH
Gma07g00521 07 4992533 4995108 Gma16g00220 16 2371634 2378255 GST
Gma19g02409 19 52612194 52615302 Gma16g00220 16 2371634 2378255 PCT
Gma03g02367 03 48806239 48808868 Gma16g00220 16 2371634 2378255 PCT
Gma16g00220 16 2371634 2378255 Gma19g02409 19 52612194 52615302 PCT
Gma16g00220 16 2371634 2378255 Gma03g02367 03 48806239 48808868 PCT