Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00182 ATGCAGCAGACACCGCCTATGATTCCTATGATGCCTTCGTTCCCACCTACGAACATAACCACCGAGCAGATTCAAAAATACCTTGATGAGAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCAGAATGTGCCCAGTACCAAGCTCAGCTTCAAAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCTCAAACACCAGCCATGCCTCCACAGATGGCACCACACCCTGCCATGCAACCAGGATTCTATATGCAACATCCTCAGGCTGCAGCAGCAGCAATGGCTCAGCAGCAGCAGCAAGGAATGTTCCCCCAGAAAATGCCATTGCAATTTGGCAATCCACATCAAATGCAGGAACAACAGCAGCAGCTACACCAGCAAGCCATCCAAGGTCAAATGGGACTGAGACCTGGAGGAATAAATAATGGCATGCATCCAATGCACAATGAGGGCGGCAACAGCGGTGGTCCACCCTCGGCTACCGGTCCGAACGACGCACGTGGTGGAAGCAAGCAAGATGCTTCTGAGGCTGGAACAGCTGGTGGAGATGGCCAAGGCAGCTCTGCAGCTGCTCATAACAGTGGAGATGGTGAAGAGGCAAAGTGA 633 0.5024 MQQTPPMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQMAPHPAMQPGFYMQHPQAAAAAMAQQQQQGMFPQKMPLQFGNPHQMQEQQQQLHQQAIQGQMGLRPGGINNGMHPMHNEGGNSGGPPSATGPNDARGGSKQDASEAGTAGGDGQGSSAAAHNSGDGEEAK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00182 210 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Gma16g00182 210 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 186 IPR044779 GO:0003713
Gma16g00182 210 MobiDBLite consensus disorder prediction 163 177 - -
Gma16g00182 210 MobiDBLite consensus disorder prediction 123 210 - -
Gma16g00182 210 PANTHER BNAA09G51550D PROTEIN 1 186 - -
Gma16g00182 210 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00182 Gma-Chr16 1860743 1863696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00182 - - gmx:100804074 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00182 16 1860743 1863696 Gma16g00182 16 1860743 1863696 ECH
Gma07g00483 07 4488698 4492810 Gma16g00182 16 1860743 1863696 GST