Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00153 ATGGCCACCACAAAGCCATTGTTAACCGACTTAGCCTCCACCGTTGATCGTGTTCCCTCTAACTTCATCAGGCCCATTGGTGACCGTCCAAACCTTCAGCAACTTCACTCCTCCATTGCTTCTATTCCCATCATCGACCTTCAAGGCCTTGGTGGCTCCAATCATTCCCAAATCATCCAAAACATTGCACATGCTTGCCAAAATTATGGCTTCTTTCAAATTGTGAACCATGGGATTCCGGAGGAGGTGGTGAGCAAGATGGTGAATGTGTCAAAAGAGTTCTTTGGTTTGCCGGAGAGTGAGAGGCTGAAGAATTACTCTGATGACCCAACCAAGACCACAAGACTCTCCACCAGTTTCAATGTCAAGACTGAGAAAGTTTCCAACTGGAGAGACTTCTTGAGACTTCACTGCCACCCCCTTGAGGATTACATTCAAGAATGGCCTGGCAACCCTCCATCTTTCAGGGAAGATGTGGCGGAGTATAGTAGAAAGATGAGGGGTTTATCACTGAAGTTGCTTGAGGCAATCTCAGAGAGTTTGGGGTTGGAAAAGGATTATATAGACAAAGCATTGGGGAAACATGGGCAGCACATGGCCATAAACTACTACCCTCCATGTCCTGAGCCAGAGTTAACATATGGTTTGCCAGCTCATGCTGACCCAAATGCAATTACTATTCTGCTCCAAAATCAAGTCCCTGGCTTGCAAGTCCTCCATGATGGCAAGTGGCTAACCGTCAATCCTGTTCCTAACACCTTCATTGTCAATATTGCTGACCAAATTCAGGTGATAAGCAACGATAGGTACAAGAGTGTGCTGCATCGAGCATTGGTGAATTGTGAGAAGGAGAGAATGTCCATTCCAACATTCTATTGCCCTTCACCTGATGCATTGATAAAACCAGCACCACAACTCGTAGACAAGGAACATCCTGCGCAGTACACAAACTTCACATACAGAGAATACTACGACAAGTTCTGGATCAGAGGACTTTCAAAAGAAACATGCGTGGACATGTTCAAGGCTCAAGATTAA 1038 0.4557 MATTKPLLTDLASTVDRVPSNFIRPIGDRPNLQQLHSSIASIPIIDLQGLGGSNHSQIIQNIAHACQNYGFFQIVNHGIPEEVVSKMVNVSKEFFGLPESERLKNYSDDPTKTTRLSTSFNVKTEKVSNWRDFLRLHCHPLEDYIQEWPGNPPSFREDVAEYSRKMRGLSLKLLEAISESLGLEKDYIDKALGKHGQHMAINYYPPCPEPELTYGLPAHADPNAITILLQNQVPGLQVLHDGKWLTVNPVPNTFIVNIADQIQVISNDRYKSVLHRALVNCEKERMSIPTFYCPSPDALIKPAPQLVDKEHPAQYTNFTYREYYDKFWIRGLSKETCVDMFKAQD 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00153 345 PRINTS Isopenicillin N synthase signature 62 79 - -
Gma16g00153 345 PRINTS Isopenicillin N synthase signature 219 240 - -
Gma16g00153 345 PRINTS Isopenicillin N synthase signature 254 280 - -
Gma16g00153 345 SUPERFAMILY Clavaminate synthase-like 12 330 - -
Gma16g00153 345 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 294 IPR005123 -
Gma16g00153 345 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 3 336 - -
Gma16g00153 345 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 149 IPR026992 -
Gma16g00153 345 Gene3D - 8 330 IPR027443 -
Gma16g00153 345 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 336 - -
Gma16g00153 345 Pfam 2OG-Fe(II) oxygenase superfamily 197 294 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00153 Gma-Chr16 1572190 1574586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00153 11 342 Glycosyltransferase AT5G59530 31.471 2.16e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00153 K24028 - gmx:100788012 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g00153 16 1572190 1574586 Gma16g00153 16 1572190 1574586 ECH
Gma07g00456 07 4206783 4214398 Gma16g00153 16 1572190 1574586 GST