Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00146 ATGGGGGGAAAGAGGAGGAAGAGCGATGATGATGATGACGTGGAAGCTGAGGCTTCAGCTTCAGGTTGGAAGAAGAAAACGAGAACGACGGAGAAGGAGGAGAAGGAGAAGAAGGAGCCATTGCGTCCTTCGATGATAAAGAACAAGGAGAAGCGATCGGAGCTGCACGCCAAGCTGAAGCAGCAGAAGAAGCTCGACAAGCGCGCCAAGGCCAAGGCTCGAGACGCTGCTCTCAAGAGAGCTCTCGACCTCGGCGAGGAGCCTCCGGAGAAGAAGGTTCCTCGCACCATCGAGAACACGAGGGAACTCGACGAGACCGTTTGCAAGCCCGACGATGATGAGTTATTTGCTGGAAATGATGCTGATGAATTCGGTTCAATTTTGAATCAACAACAAACTCCCAAGATATTAATCACCACTTGCCGCTTCCATTCTACTAGGGGACCTGCCTTTATATCGGAATTGCTTTCAGTTATACCAAATGCACATTACTTCAAGAGAGGAACATATGATCTGAAAAAGATTGTAGAATATGCAAAGAAGAAGGACTTCACCTCTGTTATAGTTGTTCACACCAATCGTAGGGAACCAGATGCTCTTTTAATTATTGGTGTACCCGATGGGCCGACTGCTCATTTCAAGCTCTCAAAGCTTGTTTTGCGCAAGGATATCAAGAATCATGGAAATCCAACCGGTCACAAGCCTGAGCTTGTATTGAATAACTTCACAACACGTCTAGGGCATCGAGTTGGAAGgttgatacagtcactttttccaCAAGATCCAGAATTTAAAGGCCGGCGAGTAGTCACTTTCCACAACCAGAGAGACTTCATATTCTTCCGGCATCATCGGTACATTTTTGAAACCAAAGAAGTTAAAAAAACAGAGTCTAAAGGTAAAAAGGACAAAGAAGGCAAGAGTGAGAATGTTCCCGAACAGAAAACAATTGCCCGACTTCAGGAATGTGGCCCTCGTTTCACATTAAAGTTGATTAGCCTGCAGCATGGAACATTTGACACTAAGGGTGGGGAATATGAGTGGGTTCACAAGCCGGAAATGGACACAAGCCGAAGGAGGTTCTTCCTATGA 1092 0.4533 MGGKRRKSDDDDDVEAEASASGWKKKTRTTEKEEKEKKEPLRPSMIKNKEKRSELHAKLKQQKKLDKRAKAKARDAALKRALDLGEEPPEKKVPRTIENTRELDETVCKPDDDELFAGNDADEFGSILNQQQTPKILITTCRFHSTRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSVIVVHTNRREPDALLIIGVPDGPTAHFKLSKLVLRKDIKNHGNPTGHKPELVLNNFTTRLGHRVGRLIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKTESKGKKDKEGKSENVPEQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00146 363 MobiDBLite consensus disorder prediction 1 72 - -
Gma16g00146 363 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 34 363 IPR044281 GO:0006364|GO:0042134
Gma16g00146 363 SUPERFAMILY Class II aaRS ABD-related 134 337 - -
Gma16g00146 363 Gene3D - 134 330 - -
Gma16g00146 363 MobiDBLite consensus disorder prediction 293 312 - -
Gma16g00146 363 ProSiteProfiles Brix domain profile. 134 340 IPR007109 GO:0006364|GO:0019843
Gma16g00146 363 SMART Brix_2 137 334 IPR007109 GO:0006364|GO:0019843
Gma16g00146 363 PANTHER RIBOSOME PRODUCTION FACTOR 1 34 363 - -
Gma16g00146 363 Pfam Brix domain 149 332 IPR007109 GO:0006364|GO:0019843
Gma16g00146 363 MobiDBLite consensus disorder prediction 293 316 - -
Gma16g00146 363 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00146 Gma-Chr16 1419735 1424163 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00146 K14846 - gmx:100791194 632.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00449 07 4076880 4081025 Gma16g00146 16 1419735 1424163 GST