Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00128 ATGGCGGAGAAATCATGCATCAAGCGCCTTCAGAAGGAATATAGAGCCCTTTGTAAAGAGCCAGTTTCTCATGTTGTGGCTCGTCCTTCACCGAGTGATATTCTTGAGTGGCATTATGTGTTGGAGGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTACTATGGAAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGGTTCATGACACAGAAAAAGATCTGTTTGTCTATGAGTGACTTTCATCCAGAAAGTTGGAATCCCATGTGGTCTGTATCAAGGTCAGAAAGTTTTAGTTGTGAATCTTCTGTTTTGCAGATGGACAACAGTCCAACCACTGGCAGTGTAAACACCACCACTGCTGAGAAGCAGCGTCTAGCAAAATCTTCCCTTTCTTTCAACTGTAAGAATGCTACATTCAGGAAGATCTTCCCTGAGTATGTGGAGAAGTACAACCAGCAACAGCTTTCTGAGCAGGCTGCTCCAGAGAGGGTCTCATTGGATACGTCTCCCGACAAGAGTTCAAGGCCAGTTTTGGAAAAGAAATTAGAATCCAATGGAGAAGACATGAAAAGAGTAGATGGGTTGAAGGAAGTGAGGAAGAACAGAAAACCATTCCCAACGTGGATGATGTTATTACTCTTCTCCATCTTTGGGGTTGTAATGGCATTACCACTGCTTCAGCTGTGA 726 0.4339 MAEKSCIKRLQKEYRALCKEPVSHVVARPSPSDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSRSESFSCESSVLQMDNSPTTGSVNTTTAEKQRLAKSSLSFNCKNATFRKIFPEYVEKYNQQQLSEQAAPERVSLDTSPDKSSRPVLEKKLESNGEDMKRVDGLKEVRKNRKPFPTWMMLLLFSIFGVVMALPLLQL 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00128 241 Pfam Ubiquitin-conjugating enzyme 9 105 IPR000608 -
Gma16g00128 241 Gene3D Ubiquitin Conjugating Enzyme 1 179 IPR016135 -
Gma16g00128 241 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 165 IPR000608 -
Gma16g00128 241 MobiDBLite consensus disorder prediction 170 190 - -
Gma16g00128 241 CDD UBCc 7 160 IPR000608 -
Gma16g00128 241 PANTHER BNAA06G11590D PROTEIN 3 241 - -
Gma16g00128 241 SUPERFAMILY UBC-like 5 105 IPR016135 -
Gma16g00128 241 SMART ubc_7 8 165 - -
Gma16g00128 241 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00128 Gma-Chr16 1274614 1277210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00128 1 241 Miscellaneous Gene Families AT1G17280 74.074 7.47e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00128 K04554 - gmx:100789952 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00434 07 3953305 3958053 Gma16g00128 16 1274614 1277210 GST