Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma16g00109 ATGGATTCAAATTCAACAAAGGAGAAGCTTCAGAACAGTGTTGCTGTTGTTGCAGATAGAGCTGACCTTAAGTCTTGctatatgcagaagttcaggctctatgagactcgctcgAAATTTTACATGATTGGAAGAGACAAAAACAGAACATGTTGGAGGGTCTTAAAGATTGACAGATTGGAGCCATCTGAATTGAATATCGTTGAAGATTCAACATTATACTCAGAAATTGAGTGTTGTGACCTTCTGAGGCGGATACATGAAGGAAACAAGTCAACAGGGGGGCTTAAATTTGTAACAACTTGCTATGGAATCATCGGGTTTATCAAATTTCTTGAGCCATATTACATGCTGCTTATAACAAAACGAAGAAAGATCGGCACAATCTGTGGGCACACTATATATGCTATCACAAAGAGCGAAATGGTCCCAATTCCTCATGCTACTGTGCGATCCAAAATGGCTTATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACGAAGGACTTCTTTTTCAGCTACTCCTACAATGTCATGCTTAGTCTTCAACGGAACTTATCTGATCATAATACTGCAGGACAATCACTTTATGAAACCCTTTTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAATAGTCTCCAGAATACTTCCTGGACTATAGCCTTAGTGTATGGCTTTTTTAAACAGATCAAACTTTTTATATCTGACAATGAGTTCAACCTGACTATCATTGCTAGGCGCTCACGGCATTATGCTGGGACCAGATATTTGAAACGAGGAGTGAATGAAAAGGGTAGAGTAGCCAATGATGTTGAGACAGAGCAGATCATCTTTACAGATGCTCGTGATGGACGCCCAATGCAAATCAGTTCTGTGGTGCAGATCCGGGGTTCAATCCCTCTGTTCTGGTCTCAGGAAACCTCTAGATTGAATATAAAACCTGACATTATATTATCAAGGAAGGACTCAAATTTTGAAGCCACAAGACTTCATTTTGAAAATCTTGTCAAGAGATATGGACATCCAATTATTATACTGAACTTGATAAAGACACGTGAGAAGAAGCCTCGAGAAACTATTCTGCGAGCCGAGTTTGCGAATGCTGTTAGGTCTCTTAATAAAAATTTGAAAGGGGAAAATCGCCTGAGGTTCCTTCATTGGGATCTGCATAGGCATTCAAGATGCAGCAAGGCTACTAATGTGTTGGGACAACTGGGAAAAGTGGCAGCATATGCACTGAAGCTGACTGGCATCTTCTACTGTCCAGTGACATCAAATGTGAGGCTAGATGGATTTTCACAGTATTCCTACTCTGAGAATTACATTGTCACTGATCACTGCATCACAGATCAAGCTAGTATAAACAAGGATAATGTTGATAAAGAAACAGAAATTATCAATTGTTACTATAGTGGTGATGAGAACAAAGATTACAGTGTCAAACCCCAGATGCTTCAATCCGGGGTCTTGAGGACTAATTGTATAGACTGCTTAGATCGAACCAATGTTGCTCAATATGCTTATGGACTAGCTGCACTTGGATATCAGCTACAAGCTTTAGGATTTACTGAAACCCCGAATATTGATCTTGATAACCCTTTGGCCAAGGAATTAATGGAAGTCTATGAGTCCATGGGCGACACATTAGCCTTTCAATATGGGGGTTCTGCGGCACACAATAAGATATTTTCTGAGAGAAGAGGTCAATGGAAGGCAGCAGCCCAATCCCAGGAATTTATTCGAACACTACAGCGTTATTACAACAACACATATTTAGATGGTGATAAGCAAAAAGCAATTAACTTACTCTTGGGGCATTTTCAGCCCCAACAGGGAAAACCAGCACTATGGGAGCTAGATTCAGATCAGCATTACACTGTCAAGAAACATGGCCTGTATTTAGCCGATGACAGCATTAGGTCAACTATTAAAAGATCGCTATCAGATGGTAACATTCTCAGTGAAAGTGACACTACAATTAGGAACTTGAATGTTACAAATGGTCAGAACTCGTCTGAAAAACCTGATAAGCGTTTCCTTTCGGGGTCTACTCCAGATATCTTTACCTGTGGAAGTGATATTTGTCATTGCAGGCAGATATATGTCAAGGGCCAAATTTGTGAGAGTGATCATATTTGTTATGATGAACATGGAGATGCATGTGACTGCTCCAATTTCCTTGATGTGGACTGGCTTTCTTCTTCTGGAAATTCTTGTGAAGAGGAATTACTTGAAAGGTCAACCAGCATCTCCTCAGAGAATATTGCGAATGAACTAATAACTACTGAGACATCTGCAAGTGAATCTGGATCCAGCATTAAGGGAAGGCCGAGTGGAGAAGAACTCAACAAAGATAGCAAATACAGCGAAAGCTTTGAACGTTGGATAACTGAAGGGGAGATGCTTTTTGTTTGA 2439 0.3952 MDSNSTKEKLQNSVAVVADRADLKSCYMQKFRLYETRSKFYMIGRDKNRTCWRVLKIDRLEPSELNIVEDSTLYSEIECCDLLRRIHEGNKSTGGLKFVTTCYGIIGFIKFLEPYYMLLITKRRKIGTICGHTIYAITKSEMVPIPHATVRSKMAYSKDENRYKKLLCSVDLTKDFFFSYSYNVMLSLQRNLSDHNTAGQSLYETLFVWNEFLTRGIRNSLQNTSWTIALVYGFFKQIKLFISDNEFNLTIIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIIFTDARDGRPMQISSVVQIRGSIPLFWSQETSRLNIKPDIILSRKDSNFEATRLHFENLVKRYGHPIIILNLIKTREKKPRETILRAEFANAVRSLNKNLKGENRLRFLHWDLHRHSRCSKATNVLGQLGKVAAYALKLTGIFYCPVTSNVRLDGFSQYSYSENYIVTDHCITDQASINKDNVDKETEIINCYYSGDENKDYSVKPQMLQSGVLRTNCIDCLDRTNVAQYAYGLAALGYQLQALGFTETPNIDLDNPLAKELMEVYESMGDTLAFQYGGSAAHNKIFSERRGQWKAAAQSQEFIRTLQRYYNNTYLDGDKQKAINLLLGHFQPQQGKPALWELDSDQHYTVKKHGLYLADDSIRSTIKRSLSDGNILSESDTTIRNLNVTNGQNSSEKPDKRFLSGSTPDIFTCGSDICHCRQIYVKGQICESDHICYDEHGDACDCSNFLDVDWLSSSGNSCEEELLERSTSISSENIANELITTETSASESGSSIKGRPSGEELNKDSKYSESFERWITEGEMLFV 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma16g00109 812 Pfam SacI homology domain 103 401 IPR002013 GO:0016791
Gma16g00109 812 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 812 IPR043573 GO:0043813|GO:0046856
Gma16g00109 812 MobiDBLite consensus disorder prediction 771 796 - -
Gma16g00109 812 ProSiteProfiles Sac phosphatase domain profile. 167 563 IPR002013 GO:0016791
Gma16g00109 812 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 1 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma16g00109 Gma-Chr16 1052746 1064444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma16g00109 28 810 Acyl Lipid Metabolism Gene Families AT5G20840 56.793 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma16g00109 K22913 - gmx:100806380 1612.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00413 07 3698956 3710024 Gma16g00109 16 1052746 1064444 GST